Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq4980257 102 4e-17 >seq4980257 Length=2185 Score = 102 bits (112), Expect = 4e-17 Identities = 302/457 (66%), Gaps = 19/457 (4%) Strand=Plus/Plus Query 3627 TATATTTTGCTGACGTATGCGCTGGTCCAGGTGGTTTCAGTGAATATATGTTATGGAGAA 3686 |||| |||||||| | |||||||| ||||| |||||| ||||| || ||||||||| Sbjct 394 TATACTTTGCTGATATCTGCGCTGGACCAGGAGGTTTCTCAGAATACATTCTATGGAGAA 453 Query 3687 AGAAATGGAATATCAAAGGTTATGGTATGACG-TTACGCGaaaaaaaTGATTTTCAACT- 3744 |||| ||| | ||| |||| |||| | || ||| | || |||| |||||| || | Sbjct 454 AGAAGTGGGAGTGCAAGGGTTTTGGTTTTACCCTTAAGAGACAAAA-TGATTTCAAATTA 512 Query 3745 GAACAGATTTTACGATAACTTTTCGGAAACTTTACACCCGTATTATGGTCCGCT------ 3798 | ||| |||||| | | | ||||| || | || || ||||| || | Sbjct 513 GGACA-ATTTTATGCTGGTACACCTGAAACGTTCGAGCCTTACTATGG--CGTTGGTGGA 569 Query 3799 -TAAC----GATGGTAATATCTACAATTCACAAAATCAGAAAGGTTTTTGT-GAAATGAT 3852 ||| ||||| ||||||| || |||| | || ||| | | || Sbjct 570 GTAAATGGGGATGGGGATATCTATGTCCCAGCAAATTTAACAGATTTCCGCAGGTTTGTG 629 Query 3853 TATGAAAGATACCGAAGGAAAAGGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGT 3912 ||||| |||||||| |||||||| || ||| | ||||||||||| || || || || Sbjct 630 CTTGAAA-ATACCGAAAACAAAGGTGTTCACTTTGTTATGGCTGACGGCGGATTTTCAGT 688 Query 3913 TGAGGGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTT 3972 ||| || |||| ||||| ||||| | || || || ||||||| | || | ||| Sbjct 689 TGAAGGCAAAGAGAATATTCAAGAGGTTTTGTCCAAGCGCTTGTATTTATCCCAGTTTTT 748 Query 3973 AATTGCATTGATGATCATACGAATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATT 4032 || || |||| || | | |||||| | |||| |||| | || || | || Sbjct 749 GTGCCCACTGTTGATACTAAGGACAAATGGTCACTTTGTTTGCAAAGTGTTTGACCTCTT 808 Query 4033 TACACCTTTTAGTGCTGGTTTAGTGTATTTGATGTAT 4069 |||| ||||||| |||||||| || || ||| || Sbjct 809 TACAAGATTTAGTGTGGGTTTAGTTTACTTAATGCAT 845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 259746363922225