Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq1968142 114 6e-21 seq3443390 107 9e-19 seq288138 107 9e-19 seq2098226 104 1e-17 seq37854 104 1e-17 seq4688574 100 1e-16 seq4245806 100 1e-16 seq4164526 100 1e-16 seq1778062 100 1e-16 seq19545 100 1e-16 seq334135 98.7 5e-16 seq4758847 96.9 2e-15 seq1194833 96.9 2e-15 seq4805992 91.5 7e-14 seq626729 91.5 7e-14 seq124256 89.7 3e-13 seq1101922 87.8 9e-13 >seq1968142 Length=226 Score = 114 bits (126), Expect = 6e-21 Identities = 73/80 (91%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||| |||| ||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 80 AAAAATTCAACTTGGCCCATGAGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGAC 21 Query 11504 GCTCTRACCAACTGAGCTAA 11523 ||||| |||||||||||||| Sbjct 20 GCTCTAACCAACTGAGCTAA 1 >seq3443390 Length=322 Score = 107 bits (118), Expect = 9e-19 Identities = 75/86 (87%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 || || |||| ||||||||||| |||||||||| ||||||||||||| |||||||||| Sbjct 172 AAGAATTCAACTTGGCCCATGAGGGGATCGAACCCACGACCTTCGCGTTGTTAGCACGAC 113 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||| |||| Sbjct 112 GCTCTAACCAACTGAGCTAACAGGCC 87 >seq288138 Length=3487 Score = 107 bits (118), Expect = 9e-19 Identities = 75/86 (87%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||| |||| ||||||||||| |||||||||| ||||||||||||||||||| |||| Sbjct 3032 AAAAATTCAACTTGGCCCATGAGGGGATCGAACCCACGACCTTCGCGTTATTAGCCCGAC 2973 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||| | |||||||||||||| |||| Sbjct 2972 GCTGTAACCAACTGAGCTAACAGGCC 2947 >seq2098226 Length=232 Score = 104 bits (114), Expect = 1e-17 Identities = 73/84 (87%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 11446 AAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGC 11505 |||| ||| |||||| ||| |||||||||| |||||||||||||||||||||||||| Sbjct 149 AAAAACAACCTGGCCCGTGAGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGC 208 Query 11506 TCTRACCAACTGAGCTAATGGGCC 11529 ||| |||||||||||||| |||| Sbjct 209 TCTAACCAACTGAGCTAACAGGCC 232 >seq37854 Length=41072 Score = 104 bits (114), Expect = 1e-17 Identities = 74/86 (86%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||| |||| || ||||||||| |||| ||||| ||||||||||||||||||||||| Sbjct 20152 AAAAATTCAACTTCGCCCATGAAGGGATGGAACCCACGACCTTCGCGTTATTAGCACGAT 20211 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| ||||||| |||||| |||| Sbjct 20212 GCTCTGACCAACTCAGCTAACAGGCC 20237 >seq4688574 Length=746 Score = 100 bits (110), Expect = 1e-16 Identities = 72/84 (86%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 11446 AAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGC 11505 |||| ||| |||||| ||| |||||||||| |||||||||||||||||||||||||| Sbjct 586 AAAAACAACCTGGCCCGTGAGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGC 527 Query 11506 TCTRACCAACTGAGCTAATGGGCC 11529 || |||||||||||||| |||| Sbjct 526 TCGAACCAACTGAGCTAACAGGCC 503 >seq4245806 Length=485 Score = 100 bits (110), Expect = 1e-16 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||| ||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 74 TGGCCCGTGAGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 15 Query 11516 TGAGCTAATGGGCC 11529 |||||||| |||| Sbjct 14 TGAGCTAACAGGCC 1 >seq4164526 Length=459 Score = 100 bits (110), Expect = 1e-16 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||| ||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 386 TGGCCCGTGAGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 445 Query 11516 TGAGCTAATGGGCC 11529 |||||||| |||| Sbjct 446 TGAGCTAACAGGCC 459 >seq1778062 Length=221 Score = 100 bits (110), Expect = 1e-16 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||| ||| ||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct 52 TGGCCCGTGAGGGGATCGAACACTCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 111 Query 11516 TGAGCTAATGGGCC 11529 |||||||| |||| Sbjct 112 TGAGCTAACAGGCC 125 >seq19545 Length=73499 Score = 100 bits (110), Expect = 1e-16 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||| ||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 67059 TGGCCCGTGAGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 67000 Query 11516 TGAGCTAATGGGCC 11529 |||||||| |||| Sbjct 66999 TGAGCTAACAGGCC 66986 >seq334135 Length=39924 Score = 98.7 bits (108), Expect = 5e-16 Identities = 77/93 (83%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 11437 AATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496 || ||| |||||| | | |||||| || |||||||||| ||||||||||||||||| Sbjct 14799 AAATAAAAAAAAACCCCACTGGCCCGTGTGGGGATCGAACCCACGACCTTCGCGTTATTA 14740 Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||| ||| |||||||||| |||| Sbjct 14739 GCACGACGCTCTAACCGACTGAGCTAACAGGCC 14707 >seq4758847 Length=832 Score = 96.9 bits (106), Expect = 2e-15 Identities = 75/90 (83%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || |||||| | | |||||| || |||||||||| ||||||||||||||||||||| Sbjct 590 AAAAAAAAACTACACTGGCCCGTGTGGGGATCGAACCCACGACCTTCGCGTTATTAGCAC 649 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||||| ||| |||||||||| ||||| Sbjct 650 GACGCTCTAACCGACTGAGCTAACAGGCCG 679 >seq1194833 Length=930 Score = 96.9 bits (106), Expect = 2e-15 Identities = 58/62 (94%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct 392 GGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACGGG 451 Query 11528 CC 11529 || Sbjct 452 CC 453 >seq4805992 Length=911 Score = 91.5 bits (100), Expect = 7e-14 Identities = 69/80 (86%), Gaps = 4/80 (5%) Strand=Plus/Plus Query 11452 AAATTGGCCC--ATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTR 11509 |||||||||| ||| |||||||||| ||||||||||||||| ||||||||||||| Sbjct 501 AAATTGGCCCGCATGG--GGATCGAACCCACGACCTTCGCGTTATCAGCACGACGCTCTA 558 Query 11510 ACCAACTGAGCTAATGGGCC 11529 |||| ||||||||| ||||| Sbjct 559 ACCAGCTGAGCTAACGGGCC 578 >seq626729 Length=14452 Score = 91.5 bits (100), Expect = 7e-14 Identities = 69/81 (85%), Gaps = 1/81 (1%) Strand=Plus/Minus Query 11444 AAAAAATCAAA-TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 |||||||| || || ||||||| |||||||||| | |||||||||||||||| |||| Sbjct 343 AAAAAATCCAACTTCCCCCATGAGGGGATCGAACCCACTACCTTCGCGTTATTAGAACGA 284 Query 11503 CGCTCTRACCAACTGAGCTAA 11523 |||||| |||||||||| ||| Sbjct 283 CGCTCTAACCAACTGAGTTAA 263 >seq124256 Length=762 Score = 89.7 bits (98), Expect = 3e-13 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 11469 GATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGC 11528 ||||||||| |||||||||||||||||||||||||||||| ||||||||| |||| ||| Sbjct 170 GATCGAACCCTCGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAACTAACAGGC 229 Query 11529 C 11529 | Sbjct 230 C 230 >seq1101922 Length=561 Score = 87.8 bits (96), Expect = 9e-13 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11469 GATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGC 11528 ||||||||| ||||||||||||||||||||||||||||| ||| |||||||||| ||| Sbjct 561 GATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCGACTGAGCTAACAGGC 502 Query 11529 CG 11530 || Sbjct 501 CG 500 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 245599364454700