Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_006657.1 Length=19820 Score E Sequences producing significant alignments: (Bits) Value seq8077 100 3e-17 seq114408 96.9 4e-16 seq15242 95.1 1e-15 seq4728483 91.5 2e-14 seq4978754 89.7 6e-14 seq32315 89.7 6e-14 seq96074 87.8 2e-13 seq171020 82.4 9e-12 seq162796 82.4 9e-12 seq2475167 80.6 3e-11 seq728305 80.6 3e-11 seq634847 80.6 3e-11 >seq8077 Length=98628 Score = 100 bits (110), Expect = 3e-17 Identities = 97/123 (79%), Gaps = 4/123 (3%) Strand=Plus/Minus Query 12771 GAAATCTTTTAAATAAAGGT--ACATCAGGACCTGAGGTTGTAGGTATTTTAAGTTCAAA 12828 |||| | |||||| ||| | ||||||||||| || | || ||| ||||| |||||||| Sbjct 19457 GAAAGCATTTAAA--AAGCTCAACATCAGGACCCGATGATGCAGGCATTTTCAGTTCAAA 19400 Query 12829 AACACCCCTGAGGATAAGTTCAAATATGTGATGCCTGCAAGGCAAATACAATAGtttttt 12888 ||||| || |||| || |||||||||||||||| | || || |||||||| || | | | Sbjct 19399 AACACTTCTCAGGACAATTTCAAATATGTGATGCTTACATGGTAAATACAAAAGATCTGT 19340 Query 12889 ttC 12891 ||| Sbjct 19339 TTC 19337 >seq114408 Length=56023 Score = 96.9 bits (106), Expect = 4e-16 Identities = 161/227 (71%), Gaps = 7/227 (3%) Strand=Plus/Minus Query 12771 GAAATCTTTTAAATAAAGGTACATCAGGACCTGAGGTTGTAGGTATTTTAAGTTCAAAAA 12830 |||| | |||||| | | |||| ||||| | | ||| || ||||| |||||||||| Sbjct 7383 GAAAGCATTTAAAAAGCTGAACATTGGGACCCAATGATGTGGGCATTTTCAGTTCAAAAA 7324 Query 12831 CACCCCTG-AGGATAAGTTCAAATATGTGATGCCTGCAAGGCAAATACAATAGttttttt 12889 ||| || || | || |||||||||||||||||| || || |||||| | || | |||| Sbjct 7323 CACTTTTGCAGAACAATTTCAAATATGTGATGCCTACATGGTAAATACCAAAGATCTTTT 7264 Query 12890 tCAAGCAACCGTTCC--AGTGAAAC-TGCAGCTCCTTTACTTGATCCTAGATTTGCAGCA 12946 || | || ||||| | | | || |||| |||||| | | || ||||||| || Sbjct 7263 TCCATCATTTGTTCCAAAATTACACTTGCA--CCCTTTAAGT-AACCAAGATTTGATGCC 7207 Query 12947 GTAGTATCACAGCATAGAGCTTTAATAAAGTCTGGAATTCCCCAATC 12993 |||| || || || |||||||| | |||| || | ||||||| Sbjct 7206 ATAGTGTCGCAACACAGAGCTTTTACTTTATCTGTAAGTTCCCAATC 7160 >seq15242 Length=49370 Score = 95.1 bits (104), Expect = 1e-15 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 12771 GAAATCTTTTAAATAAAGGTACATCAGGACCTGAGGTTGTAGGTATTTTAAGTTCAAAAA 12830 |||| | |||||| | | ||||||| ||| || | || || ||||| |||||||||| Sbjct 40901 GAAAGCGTTTAAAAAGCTGAACATCAGAACCCGATGATGCGGGCATTTTCAGTTCAAAAA 40960 Query 12831 CACCCCTGAGGATAAGTTCAAATATGTGATGCCTGCAAGGCAAATACAATAGtttttttt 12890 ||| | || |||| |||||||||||||||||| || || |||||||| || | | ||| Sbjct 40961 CACTTCGCAGCATAATTTCAAATATGTGATGCCTACATGGTAAATACAAAAGATCTGTTT 41020 Query 12891 CAAGCAACCGTTCCA 12905 | | || |||||| Sbjct 41021 CCATCATTTGTTCCA 41035 >seq4728483 Length=792 Score = 91.5 bits (100), Expect = 2e-14 Identities = 145/203 (71%), Gaps = 10/203 (5%) Strand=Plus/Plus Query 12771 GAAATCTTTTAAATAAAGGTACATCAGGACCTGAGGTTGTAGGTATTTTAAGTTCAAAAA 12830 |||| | |||||| | | ||| ||||| |||| || || ||||| |||||||||| Sbjct 71 GAAAGCATTTAAAAAGCTGAACACCAGGAA--GAGGATGGGGGCATTTTCAGTTCAAAAA 128 Query 12831 CACCCCTGAGGATAAGTTCAAATATGTGATGCCTGCAAGGCAAATACAATAGtttttttt 12890 ||| | |||| | ||||||||| ||||||||| || || |||||||| || | | ||| Sbjct 129 CACTTCGCAGGACAGGTTCAAATACGTGATGCCTACATGGTAAATACAAAAGATCTGTTT 188 Query 12891 CAAGCAACCGTTCCAGTGAAACTGCA---GC-TCCTTTACTTGATCCTAGATTTGCAGCA 12946 | | || ||||| ||||| || || |||||| | | || || |||| || Sbjct 189 CCATCATTTATTCCA---AAACTACACTTGCACCCTTTAAAT-AACCAAGGTTTGATGCC 244 Query 12947 GTAGTATCACAGCATAGAGCTTT 12969 ||||| || || || |||||||| Sbjct 245 GTAGTGTCGCAACACAGAGCTTT 267 >seq4978754 Length=2097 Score = 89.7 bits (98), Expect = 6e-14 Identities = 143/203 (70%), Gaps = 8/203 (4%) Strand=Plus/Minus Query 12771 GAAATCTTTTAAATAAAGGTACATCAGGACCTGAGGTTGTAGGTATTTTAAGTTCAAAAA 12830 |||| | |||||| | | ||||| ||||| || | | | || ||||| |||||||||| Sbjct 1108 GAAAGCGTTTAAAAAGCTGAACATCGGGACCCGATGATCTTGGCATTTTCAGTTCAAAAA 1049 Query 12831 CACCCCTGAGGATAAGTTCAAATATGTGATGCCTGCAAGGCAAATACAATAGtttttttt 12890 ||| | |||| | ||||||||| |||||||| || |||||||||| || | | ||| Sbjct 1048 CACTTCGCAGGACAGTTTCAAATATTTGATGCCTACATAGCAAATACAACAGATCTATTT 989 Query 12891 CAAGCAACCGTTCCAGTGAAACTGCAGCT----CCTTTACTTGATCCTAGATTTGCAGCA 12946 | | || |||||| ||| | || | |||||| | | || || |||| || Sbjct 988 CCATCATTTGTTCCA---AAATTACACTTTCACCCTTTAAGT-AACCAAGGTTTGATGCC 933 Query 12947 GTAGTATCACAGCATAGAGCTTT 12969 ||||| || || || |||| ||| Sbjct 932 GTAGTGTCGCAACACAGAGTTTT 910 >seq32315 Length=75945 Score = 89.7 bits (98), Expect = 6e-14 Identities = 146/206 (71%), Gaps = 11/206 (5%) Strand=Plus/Plus Query 12771 GAAATCTTTTAAATAAAGGTACATCAGGACCTGAGGTTGTAGGTATTTTAAGTTCAAAAA 12830 |||| | |||||| || | ||||| ||||| || | || || |||| |||||||||| Sbjct 53010 GAAAGCGTTTAAAAAACTGAACATCGGGACCCGATGATGCGGGCGTTTTCAGTTCAAAAA 53069 Query 12831 CAC--CCCTG--AGGATAAGTTCAAATATGTGATGCCTGCAAGGCAAATACAATAGtttt 12886 ||| | ||| |||| || |||||||||||||||||| || || ||| | || || | | Sbjct 53070 CACTTCGCTGGCAGGACAATTTCAAATATGTGATGCCTACATGGTAAACAAAAAAGATCT 53129 Query 12887 ttttCAAGCAACCGTTCCAGTGAAACTGCA---GCTCCTTTACTTGATCCTAGATTTGCA 12943 |||| | || |||||| ||| | || || || ||| | | || || |||| Sbjct 53130 GTTTCCATCATTTGTTCCA---AAATTACACTTGCACCCTTAAGT-AACCAAGGTTTGAT 53185 Query 12944 GCAGTAGTATCACAGCATAGAGCTTT 12969 || ||||| || || || |||| ||| Sbjct 53186 GCCGTAGTGTCGCAACACAGAGTTTT 53211 >seq96074 Length=55192 Score = 87.8 bits (96), Expect = 2e-13 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 12765 TCTCTCGAAATCTTTTAAATAAAGGTACATCAGGACCTGAGGTTGTAGGTATTTTAAGTT 12824 ||| | |||| | |||||| | | ||||| | ||| || | || || ||||| |||| Sbjct 3380 TCTGTTGAAAGCGTTTAAAAAGCTGAACATCGGAACCCGATGATGCGGGCATTTTCAGTT 3321 Query 12825 CAAAAACACCCCTGAGGATAAGTTCAAATATGTGATGCCTGCAAGGCAAATACAATAGtt 12884 ||||||||| | |||| || |||||| || |||||||| || || |||||||| || | Sbjct 3320 CAAAAACACTTCACAGGACAATTTCAAACATATGATGCCTACATGGTAAATACAAAAGCT 3261 Query 12885 ttttttCAAGCAACCGTTCCA 12905 | |||| | || ||||||| Sbjct 3260 CTGTTTCCATCATTCGTTCCA 3240 >seq171020 Length=25587 Score = 82.4 bits (90), Expect = 9e-12 Identities = 138/199 (69%), Gaps = 8/199 (4%) Strand=Plus/Minus Query 12771 GAAATCTTTTAAATAAAGGTACATCAGGACCTGAGGTTGTAGGTATTTTAAGTTCAAAAA 12830 |||| | |||||| | | ||||| |||| | | ||| || ||||| ||||||||| Sbjct 18280 GAAAGCATTTAAAAAGCTGAACATCGGGACTCAATGATGTGGGCATTTTCCGTTCAAAAA 18221 Query 12831 CACCCCTGAGGATAAGTTCAAATATGTGATGCCTGCAAGGCAAATACAATAGtttttttt 12890 ||| | |||| || || |||| |||||||||| || || |||||||| || | | ||| Sbjct 18220 CACTTCACAGGACAATTTGAAATGTGTGATGCCTACATGGTAAATACAAAAGATCTGTTT 18161 Query 12891 CAAGCAACCGTTCCAGTGAAACTGCAGCTCCTTTACTTGATCCTAGATTTGCAGCAGTAG 12950 | | || |||||| ||| | || || | |||| ||||||| | ||| Sbjct 18160 CCATCATTTGTTCCA---AAATTACA-----CTTGCACCATCCAAGATTTGATACCATAG 18109 Query 12951 TATCACAGCATAGAGCTTT 12969 | ||||| || |||||||| Sbjct 18108 TGTCACAACACAGAGCTTT 18090 >seq162796 Length=38715 Score = 82.4 bits (90), Expect = 9e-12 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 12771 GAAATCTTTTAAATAAAGGTACATCAGGACCTGAGGTTGTAGGTATTTTAAGTTCAAAAA 12830 |||| | |||||| | | ||||||| ||| | | || || ||||| |||||||||| Sbjct 5427 GAAAGCATTTAAAAAGCTGAACATCAGAACCCAATGATGCGGGCATTTTCAGTTCAAAAA 5486 Query 12831 CACCCCTGAGGATAAGTTCAAATATGTGATGCCTGCAAGGCAAATACAATAGtttttttt 12890 | | |||| || ||||||||||||||||||||| || ||||| || || | | ||| Sbjct 5487 CTCTTTGCAGGACAATTTCAAATATGTGATGCCTGCATGGTAAATATAAAAGATCTGTTT 5546 Query 12891 CAAGCAACCGTTCCA 12905 | | || |||||| Sbjct 5547 CCATCATTTGTTCCA 5561 >seq2475167 Length=248 Score = 80.6 bits (88), Expect = 3e-11 Identities = 115/161 (71%), Gaps = 6/161 (4%) Strand=Plus/Plus Query 12812 GGTATTTTAAGTTCAAAAACACCCCTGAGGATAAGTTCAAATATGTGATGCCTGCAAGGC 12871 || ||||| ||||||||||||| | || | || |||||||||||||||||| || || Sbjct 4 GGCATTTTCAGTTCAAAAACACTTCGTAGTACAATTTCAAATATGTGATGCCTACATGGT 63 Query 12872 AAATACAATAGttttttttCAAGCAACCGTTCCAGTGAAACTGCA---GCTCCTTTACTT 12928 |||||||| || | | |||| | || ||||| ||| | || || ||||| Sbjct 64 AAATACAAAAGGTCTGTTTCCACCATTTCTTCCA---AAATTACACTTGCACCTTTTAAG 120 Query 12929 GATCCTAGATTTGCAGCAGTAGTATCACAGCATAGAGCTTT 12969 | || || |||| || ||||| || || || |||||||| Sbjct 121 TAACCAAGGTTTGATGCGGTAGTGTCCCAACACAGAGCTTT 161 >seq728305 Length=26327 Score = 80.6 bits (88), Expect = 3e-11 Identities = 86/114 (75%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 12778 TTTAAATAAAGGTACATCAGGACCTGAGGTTGTAGGTATTTTAAGTTCAAAAACACCCCT 12837 |||||| || | |||| ||||| || | || | ||||| ||||||||| ||| | Sbjct 12689 TTTAAAAAATTGAACATTGGGACCCGATGATGATAGCATTTTCAGTTCAAAACCACTTCG 12748 Query 12838 GAGGATAAGTTCAAATATGTGATGCCTGCAAGGCAAATACAATAGttttttttC 12891 |||| || |||||||||||||||||| || || |||||||| || | | |||| Sbjct 12749 CAGGACAATTTCAAATATGTGATGCCTACATGGTAAATACAAAAGATCTGTTTC 12802 >seq634847 Length=1599 Score = 80.6 bits (88), Expect = 3e-11 Identities = 86/114 (75%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 12778 TTTAAATAAAGGTACATCAGGACCTGAGGTTGTAGGTATTTTAAGTTCAAAAACACCCCT 12837 |||||| | | |||||| ||| || | || || ||||| ||||||||| |||| | Sbjct 1171 TTTAAAAAGCTGAACATCACGACACGACGATGCGGGCATTTTCAGTTCAAAAGCACCTCG 1230 Query 12838 GAGGATAAGTTCAAATATGTGATGCCTGCAAGGCAAATACAATAGttttttttC 12891 |||| || |||||||||||| ||||| || || |||||||| || | | |||| Sbjct 1231 CAGGACAATTTCAAATATGTGGTGCCTACATGGTAAATACAAAAGATCTGTTTC 1284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 59655571710675