Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq17242 113 4e-20 seq780981 111 2e-19 seq2861173 104 2e-17 seq326921 93.3 4e-14 seq247341 91.5 1e-13 seq438317 89.7 5e-13 seq314876 86.0 6e-12 seq28755 82.4 8e-11 >seq17242 Length=2525 Score = 113 bits (124), Expect = 4e-20 Identities = 104/132 (79%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 21502 ATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTTAA 21561 ||||||||| || | ||||||| || || | ||| ||||| | |||||| || || | Sbjct 2214 ATCCCTACTGATAAGTTCATTACTGAAGGTAAGACCTGGCATAAGTCCTCTTTTCTTAAG 2155 Query 21562 CCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAAC 21621 |||||||||||||||||| | || || |||||||| || ||||| |||||||| ||| | Sbjct 2154 CCAAAATATTGACGCAAAGGAACCAGAGAAGAAAATTCCTTCAACAGCAGCAAAAGCAGC 2095 Query 21622 TAATCGTTCACC 21633 || || |||||| Sbjct 2094 TACTCTTTCACC 2083 >seq780981 Length=1727 Score = 111 bits (122), Expect = 2e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 21500 TCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTT 21559 ||||||||||| || | ||||||| || || | ||| ||||| | |||||| || || Sbjct 146 TCATCCCTACTGATAAGTTCATTACTGAAGGTAAGACCTGGCATAAGTCCTCTTTTCTTA 87 Query 21560 AACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCA 21619 | |||||||||||| ||||| | || || |||||||| || ||||| |||||||| ||| Sbjct 86 AGCCAAAATATTGATGCAAAGGAACCAGAGAAGAAAATTCCTTCAACAGCAGCAAAAGCA 27 Query 21620 ACTAATCGTTCACC 21633 ||| || |||||| Sbjct 26 GCTACTCTTTCACC 13 >seq2861173 Length=269 Score = 104 bits (114), Expect = 2e-17 Identities = 158/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 65595 TATAGATGAGGGACAGTTTTTTCCAGATATTGTTAATTTTTCGGAATCTATGGCAAATAT 65654 ||||||||| | ||||||||||||||| || || | ||| | ||| ||||| ||| Sbjct 269 TATAGATGAAGCACAGTTTTTTCCAGACATCGTGACGTTTGCTGAAGAAATGGCCAATCA 210 Query 65655 TGGTAAAATTGTTATTATCGCCGCCTTAGACGGTACTTATAAAAGAAGTCCGTTTAATGA 65714 || |||||| ||||||| ||| || |||| |||| | ||||| | || | Sbjct 209 AGGAAAAATTATTATTATTGCCTGTCTAAACGGAACTTTTCGAAGAAAAGCTTTCGGAAA 150 Query 65715 TATTTTACAACTTATACCATTATCAGAGAAAGTTATAAAACTAAATGCGGTATGTATGAA 65774 ||||||||| | || || ||| | || || || ||||| || |||| || |||||| Sbjct 149 TATTTTACATTTAATTCCGTTAGCCGAAAACGTGGTAAAATTACATGCTGTTTGTATGTC 90 Query 65775 TTGTTATGGAGACGCATCTTTTTCAAAAAGAATTAGTGACGAAAA 65819 |||| | ||| || || ||| ||||| |||| | ||| |||| Sbjct 89 GTGTTTTCAAGAAGCTTCATTTACAAAATTAATTGGAGACCAAAA 45 >seq326921 Length=5948 Score = 93.3 bits (102), Expect = 4e-14 Identities = 123/170 (72%), Gaps = 7/170 (4%) Strand=Plus/Minus Query 21863 AAGTTTTCATTTACTATTCCATCACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAA 21922 || |||||| | |||||||||||||| || |||||||||| || || | ||| || ||| Sbjct 4997 AATTTTTCACTCACTATTCCATCACTAGCTGCAAAAAATGTTAAAATGTATTTAATGAAA 4938 Query 21923 TATCGTTCGTTATCTGTTAATTTTTTCCAATCTAATAAATCTTTTGATAAATCTACTTCT 21982 || |||| || | || | || || |||| | || |||| ||||| |||||| Sbjct 4937 TACTGTTCATTGACCGTAAGTTGTTCCCAA--TGAT-----TTTTCCCAAATCAACTTCT 4885 Query 21983 TCAGTTGTCCAAAAGCTAGCAATAGCCTTTTTATACATAATCCAGATATC 22032 || ||||||||| ||||| ||| || |||||||| |||| | ||| Sbjct 4884 TCTACAGTCCAAAAGAAAGCAACAGCTTTCTTATACATGGTCCATAAATC 4835 >seq247341 Length=25763 Score = 91.5 bits (100), Expect = 1e-13 Identities = 125/166 (75%), Gaps = 8/166 (5%) Strand=Plus/Minus Query 21117 AAATATTTATTTAAAAATCAGCATCTAATGAGAAAACATTA-TCTTCtttttttGACATA 21175 ||| ||||| ||||| |||||||| || | ||| || | ||||| || || | ||| Sbjct 16452 AAAAATTTAACTAAAAGTCAGCATCCAAAGT-AAAGCAGTGGTCTTCCTTCTTGGCCATT 16394 Query 21176 ATTCCCATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCC--A 21233 | ||| |||||||| || |||| | ||||||||||| || || ||||| ||| | Sbjct 16393 ACTCCACACTTTTGATATTCTGCAACTTTCTTTTCGAAAAAGTTAGTTTTTCCCTCCAGA 16334 Query 21234 ATGATATAGATTCCATAAAATCAAATGGATTTTC-AGATT-TAAAT 21277 |||| | || ||||||||||||||||||||||| | ||| ||||| Sbjct 16333 CTGATGT-GA-TCCATAAAATCAAATGGATTTTCTACATTGTAAAT 16290 >seq438317 Length=14545 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 21866 TTTTCATTTACTATTCCATCACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATAT 21925 |||||||| || || |||||||| || |||||||| || | |||| || |||| Sbjct 3419 TTTTCATTAACAATACCATCACTAGCAGCAAAAAAGGCTAGGATATGCGAAATGAAATGC 3478 Query 21926 CGTTCGTTATCTGTTAATTTTTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCA 21985 | ||| || | ||||||| ||| || |||||||||||| | ||| ||||||||| Sbjct 3479 CTTTCTGTAGATTTTAATTTCCCCCAGTCAGCTAAATCTTTTGAGAGATCCACTTCTTCA 3538 Query 21986 GTTGTCCAAAAGCTAGCAATAGCCTTTTTATACATAATCCAGATATCATTATATATTATT 22045 | |||||||| || ||||| || ||||| ||| |||||| ||| || Sbjct 3539 GCAGTCCAAAATGATGCTTCTGCCTTCTTGTACATTTGCCAAATATCAGGATACTCGATG 3598 Query 22046 GGAAATATTACAAA 22059 || || |||||||| Sbjct 3599 GGGAAAATTACAAA 3612 >seq314876 Length=46846 Score = 86.0 bits (94), Expect = 6e-12 Identities = 172/253 (68%), Gaps = 4/253 (2%) Strand=Plus/Plus Query 65569 CACATTATTGATGTAGATGTTATTGGTATAGATGAGGGACAGTTTTTTCCAGATATTGTT 65628 |||||||| || ||| | || |||||||| || | ||||||||||||||| || || Sbjct 32809 CACATTATGAATTATGATATCATCGGTATAGACGAAGCACAGTTTTTTCCAGACATCGTG 32868 Query 65629 AATTTTTCGGAATCTATGGCAAATATTGGTAAAATTGTTATTATCGCCGCCTTAGACGGT 65688 | ||| | ||| ||||| ||| || ||||| |||| || ||| |||||||| Sbjct 32869 ACGTTTGCTGAAGAAATGGCCAATCAAGGAAAAATAATTATCATTGCCTGTTTAGACGGA 32928 Query 65689 ACTTAT--AAAAGAAGTCCGTTTAATGATATTTTACAACTTATACCATTATCAGAGAAAG 65746 |||| | || ||||| | || |||| || || | || || ||| | || | | Sbjct 32929 ACTTTTCGAAGAGAAG--CTTTCGGAAATATCTTGCATTTAATTCCGTTAGCCGAAAGCG 32986 Query 65747 TTATAAAACTAAATGCGGTATGTATGAATTGTTATGGAGACGCATCTTTTTCAAAAAGAA 65806 | ||||| || |||| || | |||| ||| | ||| || || ||| ||||| || Sbjct 32987 TGGTAAAATTATATGCTGTCTATATGTCGCGTTTTCAAGAAGCTTCATTTACAAAATTAA 33046 Query 65807 TTAGTGACGAAAA 65819 || | ||| |||| Sbjct 33047 TTGGAGACCAAAA 33059 >seq28755 Length=37593 Score = 82.4 bits (90), Expect = 8e-11 Identities = 161/236 (68%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 65584 GATGTTATTGGTATAGATGAGGGACAGTTTTTTCCAGATATTGTTAATTTTTCGGAATCT 65643 ||| |||| |||||||| || | ||||||||||||||| ||||| | ||| | ||| Sbjct 15857 GATATTATCGGTATAGACGAAGCACAGTTTTTTCCAGACATTGTAACGTTTGCAGAAGAA 15798 Query 65644 ATGGCAAATATTGGTAAAATTGTTATTATCGCCGCCTTAGACGGTAC--TTATAAAAGAA 65701 ||||| ||| || ||||| |||| || ||| || | || || || || |||| Sbjct 15797 ATGGCCAATCAAGGAAAAATAATTATCATTGCCTGTCTAAATGGAACATTTCGAAGAGAA 15738 Query 65702 GTCCGTTTAATGATATTTTACAACTTATACCATTATCAGAGAAAGTTATAAAACTAAATG 65761 | | || |||| || | || || |||||| | || | || ||||| || ||| Sbjct 15737 G--CTTTCGGAAATATCTTGAATCTAATTCCATTAGCCGAAAGCGTGGTAAAATTATATG 15680 Query 65762 CGGTATGTATGAATTGTTATGGAGACGCATCTTTTTCAAAAAGAATTAGTGACGAA 65817 | || |||||| |||| | ||| || || ||| ||||| |||| | ||| || Sbjct 15679 CTGTCTGTATGTCGTGTTTTCAAGAGGCTTCGTTTACAAAATTAATTGGAGACCAA 15624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498746259603000