Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq28755 122 1e-22 seq438317 114 2e-20 seq70167 109 6e-19 seq17242 107 2e-18 seq4470012 96.9 4e-15 seq2861173 95.1 1e-14 seq2444859 89.7 6e-13 seq780981 89.7 6e-13 seq314876 86.0 7e-12 seq4386908 82.4 9e-11 >seq28755 Length=37593 Score = 122 bits (134), Expect = 1e-22 Identities = 282/417 (68%), Gaps = 21/417 (5%) Strand=Plus/Minus Query 80763 TTTTCAGGTAAAAGTACAGAATTAATTAGACGAGTTAGACGTTATCAAATAGCTCAATAT 80822 || || ||||||| || ||||||||| | || | | |||||||||||| || || || Sbjct 16043 TTCTCCGGTAAAACCACCGAATTAATTCGGAGAATAAAACGTTATCAAATTGCA-AAGAT 15985 Query 80823 -AAATGCGTGACTATAAAATATTCTAACGATAATAGATACGG---AACGGGACTATGGAC 80878 |||||| | | || || |||| |||| ||||||||||| | || | | || | Sbjct 15984 GAAATGCCTTATTAGAAGATATGCTAATGATAATAGATATAGCTCAAATGCATTAG---C 15928 Query 80879 GCATGATA-AGAATAATTTTGAAGCATTGGAAGCAACTAAACTATGTGATGTCTTGGA-- 80935 ||||| | || | ||| | ||| | || || ||| || | || | || | Sbjct 15927 ACATGACGGACAAACACTTTCA-GCAATTTCCGCTACAAAATTAATTTATTTAATGCACG 15869 Query 80936 --ATCAATTACAGATTTCTCCGTGATAGGTATCGATGAAGGACAGTTCTTTCCAGACATT 80993 || ||||| ||| | || ||||| || |||| |||||| |||||||||||| Sbjct 15868 TTATGAATTAT-GATATT------ATCGGTATAGACGAAGCACAGTTTTTTCCAGACATT 15816 Query 80994 GTTGAATTCTGTGAGCGTATGGCAAACGAAGGAAAAATAGTTATAGTAGCCGCACTCGAT 81053 || || || ||||| || ||||||||||| |||| | ||| || || Sbjct 15815 GTAACGTTTGCAGAAGAAATGGCCAATCAAGGAAAAATAATTATCATTGCCTGTCTAAAT 15756 Query 81054 GGGACATTTCAACGTAAACCGTTTAATAATATTTTGAATCTTATTCCATTATCTGAAATG 81113 || ||||||| | | || | || ||||| |||||||| ||||||||| | |||| Sbjct 15755 GGAACATTTCGAAGAGAAGCTTTCGGAAATATCTTGAATCTAATTCCATTAGCCGAAAGC 15696 Query 81114 GTGGTAAAACTAACTGCTGTGTGTATGAAATGCTTTAAGGAGGCTTCCTTTTCTAAA 81170 ||||||||| || |||||| |||||| || ||| | |||||||| ||| | ||| Sbjct 15695 GTGGTAAAATTATATGCTGTCTGTATGTCGTGTTTTCAAGAGGCTTCGTTTACAAAA 15639 >seq438317 Length=14545 Score = 114 bits (126), Expect = 2e-20 Identities = 146/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 33686 CCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAA 33745 ||| ||||||||| || || || ||||| || |||||||| || | | ||| || | Sbjct 3414 CCAGATTTTCATTAACAATACCATCACTAGCAGCAAAAAAGGCTAGGATATGCGAAATGA 3473 Query 33746 AATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTT 33805 ||| |||| | | ||| ||| ||| ||| | |||||| || | ||| |||| Sbjct 3474 AATGCCTTTCTGTAGATTTTAATTTCCCCCAGTCAGCTAAATCTTTTGAGAGATCCACTT 3533 Query 33806 CTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATT 33865 |||| | |||||||||||||| |||||||| || ||||| | ||| || ||| ||| | Sbjct 3534 CTTCAGCAGTCCAAAATGATGCTTCTGCCTTCTTGTACATTTGCCAAATATCAGGATACT 3593 Query 33866 GGATTGGGAAAATAACAAATC 33886 ||| |||||||| ||||||| Sbjct 3594 CGATGGGGAAAATTACAAATC 3614 >seq70167 Length=66857 Score = 109 bits (120), Expect = 6e-19 Identities = 101/128 (79%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 62946 ATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTG 63005 || || || || |||||||| |||||||| |||||||| ||||| ||||| || | Sbjct 49987 ATTTCTGTACATAGATTACTGCACTTGATGGTTCCTAAGTTTTGCTGATTTGATTTACGG 50046 Query 63006 TTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATC 63065 ||||| ||||| ||||| || ||| | ||||| ||||||||||||||||| || ||||| Sbjct 50047 TTACATGCATCTTTATAGAGCATGTAAGGAGTGCCAGTTTCAATCTGAGAGTCAATAATG 50106 Query 63066 GCTTTCCA 63073 || | ||| Sbjct 50107 GCATACCA 50114 Score = 82.4 bits (90), Expect = 9e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 62336 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 62395 ||| ||||| |||||||| |||||||| || | || | ||| || || || || || | Sbjct 30007 TACCTGAAACTCTCCAGATAATACTCTTCGGATATAGAAATTGCTAGTGTATGGCTCAAT 30066 Query 62396 CGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 62455 |||||||||||||| | ||| || ||||| || || || ||||| || || | | || Sbjct 30067 AGACTCATTATTTCCAAGAATCTGTGCAGTCGAAGCTGTTGGCATTGGAGCTATTAGCAA 30126 Query 62456 ACTATTTCTAAGACC 62470 ||| || || | ||| Sbjct 30127 ACTGTTCCTTACACC 30141 >seq17242 Length=2525 Score = 107 bits (118), Expect = 2e-18 Identities = 155/218 (71%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 33331 TCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGC 33390 || ||||| || ||||| || || || || || ||||| || || | || |||||| Sbjct 2213 TCCCTACTGATAAGTTCATTACTGAAGGTAAGACCTGGCATAAGTCCTCTTTTCTTAAGC 2154 Query 33391 CAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATA 33450 |||||||| || || || || ||||| ||||| |||||||| || |||||||| ||| Sbjct 2153 CAAAATATTGACGCAAAGGAACCAGAGAAGAAAATTCCTTCAACAGCAGCAAAAGCAGCT 2094 Query 33451 AGTCTCTCTCCATAACCGGC---GCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTC 33507 | ||| || ||| | || ||| || ||||| || ||||||| | |||||| Sbjct 2093 ACTCTTTCACCAAATGATGCATTAGTGTGATTAATCCAGTTCAAAGCCCAAACAGCCTTC 2034 Query 33508 TTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 33545 || || | ||| || | ||||| |||||||| || || Sbjct 2033 TTCTTAATACATGGGAGAGTTTCAATGGCATTGAACAG 1996 >seq4470012 Length=581 Score = 96.9 bits (106), Expect = 4e-15 Identities = 102/132 (77%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 80730 GGCGGACATATTCAGTTGATAATCGGCCCCATGTTTTCAGGTAAAAGTACAGAATTAATT 80789 || ||||| || || | ||| |||| | ||||||||| || |||| |||||||||||| Sbjct 117 GGAGGACAAATCCAAATTATATTCGGACTCATGTTTTCTGGAAAAACGACAGAATTAATT 176 Query 80790 AGACGAGTTAGACGTTATCAAATAGCTCAAT-ATAAATGCGTGACTATAAAATATTCTAA 80848 | ||| | | ||| |||||||| | | ||| |||| ||| | | ||||||||| || | Sbjct 177 CGGCGATTGAAACGGTATCAAATTG-TAAATCATAAGTGCCTAATTATAAAATACGCTCA 235 Query 80849 CGATAATAGATA 80860 |||||||||||| Sbjct 236 CGATAATAGATA 247 >seq2861173 Length=269 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/209 (71%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 80963 TATCGATGAAGGACAGTTCTTTCCAGACATTGTTGAATTCTG-TGAGCGTATGGCAAACG 81021 ||| ||||||| |||||| ||||||||||| | ||| | || ||| ||||| || Sbjct 269 TATAGATGAAGCACAGTTTTTTCCAGACATCG-TGACGTTTGCTGAAGAAATGGCCAATC 211 Query 81022 AAGGAAAAATAGTTATAGTAGCCGCACTCGATGGGACATTTCAACGTAAACCGTTTAATA 81081 |||||||||| |||| | ||| || | || || |||| | | ||| | || | Sbjct 210 AAGGAAAAATTATTATTATTGCCTGTCTAAACGGAACTTTTCGAAGAAAAGCTTTCGGAA 151 Query 81082 ATATTTTGAATCTTATTCCATTATCTGAAATGGTGGTAAAACTAACTGCTGTGTGTATGA 81141 ||||||| || | ||||| ||| | |||| ||||||||| || |||||| |||||| Sbjct 150 ATATTTTACATTTAATTCCGTTAGCCGAAAACGTGGTAAAATTACATGCTGTTTGTATGT 91 Query 81142 AATGCTTTAAGGAGGCTTCCTTTTCTAAA 81170 || ||| | || ||||| ||| | ||| Sbjct 90 CGTGTTTTCAAGAAGCTTCATTTACAAAA 62 >seq2444859 Length=247 Score = 89.7 bits (98), Expect = 6e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 62070 TAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGAT 62129 ||||| |||||||| || ||||| |||| | || || || ||||| | ||||| ||| Sbjct 246 TAAAAGTGCATACTTGTGAGTTTTCCATAATTTGGTTCAGCAATATGTACATTCAGAGAC 187 Query 62130 TGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGA 62189 || |||||||| || | || || | ||| || |||||||| | | | ||||||||| Sbjct 186 TGGCTTTGATCAATATAAGCACCACGGTCAGCGGCCATTTTCAAAACATTTTTTTGTGGA 127 Query 62190 ATTTCCCAAATAGT 62203 |||||||| | ||| Sbjct 126 ATTTCCCATACAGT 113 >seq780981 Length=1727 Score = 89.7 bits (98), Expect = 6e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385 |||| || ||||| || ||||| || || || || || ||||| || || | || | Sbjct 148 CCTCATCCCTACTGATAAGTTCATTACTGAAGGTAAGACCTGGCATAAGTCCTCTTTTCT 89 Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445 ||||||||||||| || || || || ||||| ||||| |||||||| || |||||||| | Sbjct 88 TAAGCCAAAATATTGATGCAAAGGAACCAGAGAAGAAAATTCCTTCAACAGCAGCAAAAG 29 Query 33446 CA 33447 || Sbjct 28 CA 27 >seq314876 Length=46846 Score = 86.0 bits (94), Expect = 7e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 80958 ATAGGTATCGATGAAGGACAGTTCTTTCCAGACATTGTTGAATTCTG-TGAGCGTATGGC 81016 || ||||| || |||| |||||| ||||||||||| || || | || ||| ||||| Sbjct 32830 ATCGGTATAGACGAAGCACAGTTTTTTCCAGACATCGT-GACGTTTGCTGAAGAAATGGC 32888 Query 81017 AAACGAAGGAAAAATAGTTATAGTAGCCGCACTCGATGGGACATTTCAACGTAAACCGTT 81076 || ||||||||||| |||| | ||| | || || || |||| | | || | || Sbjct 32889 CAATCAAGGAAAAATAATTATCATTGCCTGTTTAGACGGAACTTTTCGAAGAGAAGCTTT 32948 Query 81077 TAATAATATTTTGAATCTTATTCCATTATCTGAAATGGTGGTAAAACTAACTGCTGTGTG 81136 ||||| ||| || | ||||| ||| | |||| ||||||||| || |||||| | Sbjct 32949 CGGAAATATCTTGCATTTAATTCCGTTAGCCGAAAGCGTGGTAAAATTATATGCTGTCTA 33008 Query 81137 TATGAAATGCTTTAAGGAGGCTTCCTTTTCTAAA 81170 |||| | ||| | || ||||| ||| | ||| Sbjct 33009 TATGTCGCGTTTTCAAGAAGCTTCATTTACAAAA 33042 >seq4386908 Length=540 Score = 82.4 bits (90), Expect = 9e-11 Identities = 80/103 (78%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 80758 CCATGTTTTCAGGTAAAAGTACAGAATTAATTAGACGAGTTAGACGTTATCAAATAGCTC 80817 |||||||||| || || | |||||||||||| | ||| | | ||| |||||||| || Sbjct 291 CCATGTTTTCTGGAAATACGACAGAATTAATTCGGCGATTGAAACGGTATCAAATTGCAA 350 Query 80818 AATATAAATGCGTGACTATAAAATATTCTAACGATAATAGATA 80860 | |||||| | | | ||||||||| || ||||||||||||| Sbjct 351 ATCATAAATACCTAATTATAAAATACGCTCACGATAATAGATA 393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584117538327000