Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq4952844 96.9 3e-15 seq197271 96.9 3e-15 seq1187548 95.1 1e-14 seq215054 91.5 1e-13 seq3343411 84.2 2e-11 >seq4952844 Length=1519 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 26796 GGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAG 26855 || ||| | || || | ||| | ||| | | |||||||||||| | || || ||| Sbjct 23 GGTAAAACCATTACTTTGGAAGTTGAACCCAGTGACACCATCGAGAATGTGAAGGCAAAA 82 Query 26856 ATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAA 26915 ||| || |||||||| || || || |||||||| | ||||||| | || || || Sbjct 83 ATTCAAGATAAAGAAGGCATTCCACCTGATCAACAGCGTCTCATTTTTGCTGGAAAGCAG 142 Query 26916 CTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTG 26975 | ||||||| |||| || || ||||| ||||| |||||||| || | ||||| Sbjct 143 TTGGAAGATGGCAGAACACTCTCAGATTATAATATTCAGAAAGAATCCACACTTCATCTT 202 Query 26976 GTCCTGAGACTTAGAGGAGGAAA 26998 ||||| || || |||||||| || Sbjct 203 GTCCTCAGGCTGAGAGGAGGCAA 225 >seq197271 Length=6114 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 26796 GGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAG 26855 || ||| | || || | ||| | ||| | | ||||| || || | || || ||| Sbjct 1388 GGTAAAACCATTACTTTGGAAGTTGAACCCAGTGACACTATAGAAAACGTGAAGGCAAAA 1447 Query 26856 ATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAA 26915 ||| || |||||||| || || || ||||| ||| | ||||||| | || ||||| Sbjct 1448 ATTCAAGATAAAGAAGGCATTCCACCTGATCAGCAACGTCTCATTTTTGCAGGAAAACAG 1507 Query 26916 CTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTG 26975 | ||||||| |||| || || || || ||||| |||||||||||| | ||||| Sbjct 1508 TTGGAAGATGGCAGAACACTCTCTGATTACAATATTCAGAAAGAATCTACTCTTCATCTT 1567 Query 26976 GTCCTGAGACTTAGAGGAGGAAA 26998 ||||| ||||| |||||||| || Sbjct 1568 GTCCTCAGACTGAGAGGAGGCAA 1590 >seq1187548 Length=1734 Score = 95.1 bits (104), Expect = 1e-14 Identities = 153/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | ||||| || ||| | ||||| ||| | || || | ||| | ||| ||| Sbjct 1515 AATGCAGATCTTTGTGAAGACACTGACTGGTAAAACAATAACTCTTGAAGTGGAACCAAG 1574 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||| || || | || || |||||| || |||||||| || || || ||||| Sbjct 1575 TGACACAATTGAAAATGTGAAGGCTAAGATTCAGGATAAAGAAGGCATTCCCCCAGATCA 1634 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 ||| ||||| || | | || ||||| | ||||||| | | | | || ||||| Sbjct 1635 ACAGAGACTGATCTTTGCTGGAAAACAGTTGGAAGATGGACGCACCTTGTCTGATTATAA 1694 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTT 26987 ||||||||||| || ||| | ||| ||||||| ||||| Sbjct 1695 TATTCAAAAAGAGTCCACTTTGCATTTGGTCCTTCGACTT 1734 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| |||||| | ||||| || | ||||| | || | ||| ||| Sbjct 385 ATGCAAATCTTTGTTAAAACACTCACTGGCAAGACCATCACACTTGAGGTGGAACCAAGT 444 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | || || || || || |||||||| || || || || ||| Sbjct 445 GACACAATAGAAAATGTGAAGGCTAAAATCCAGGATAAAGAAGGAATTCCACCTGACCAA 504 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || || |||| | |||||||| | ||||||| | | | | || ||||| Sbjct 505 CAGAGGCTGATTTTTGCTGGCAAACAGTTGGAAGATGGACGCACCTTGTCTGATTATAAT 564 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTT 26987 ||||||||||| || ||| | ||| ||||||| ||||| Sbjct 565 ATTCAAAAAGAGTCCACTTTGCATTTGGTCCTTCGACTT 603 >seq215054 Length=1089 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| || || || ||||| || | || ||| | ||| | ||| | | Sbjct 838 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACTATTACCCTTGAAGTGGAACCTAGT 779 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | || ||| || || || |||||||| || || || |||||| Sbjct 778 GACACAATTGAAAATGTAAAAGCTAAAATCCAAGATAAAGAAGGCATTCCCCCTGATCAA 719 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || || || | | |||||||| || || |||| | | | || ||||||||| Sbjct 718 CAGAGGCTTATATTTGCGGGCAAACAGCTAGAGGATGGACGTACCCTCTCAGACTATAAC 659 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAG 26983 || ||||| ||||| || | ||||||||| |||| Sbjct 658 ATCCAAAAGGAATCAACACTTCATCTGGTCTTGAG 624 >seq3343411 Length=310 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 26778 TTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATC 26837 ||||| || || ||||||| || | || ||| | ||| | ||| | | ||||| || Sbjct 309 TTTGTGAAGACTCTAACTGGTAAGACCATTACCCTTGAAGTGGAACCTAGTGACACGATA 250 Query 26838 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTC 26897 || | || ||| || || || |||||||| || || || ||||| || || || Sbjct 249 GAAAATGTAAAAGCTAAAATCCAAGATAAAGAAGGCATTCCCCCAGATCAGCAGAGGCTT 190 Query 26898 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAA 26957 || | | |||||||| || || |||| | | | || ||||||||||| ||||| Sbjct 189 ATATTTGCAGGCAAACAGCTAGAGGATGGACGCACCCTCTCAGACTATAACATCCAAAAG 130 Query 26958 GAATCTACTATCCATCTGGTCCTGAG 26983 ||||| || | ||||||||| |||| Sbjct 129 GAATCAACACTTCATCTGGTCTTGAG 104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448826325534000