Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq4952844 118 9e-22 seq1107188 93.3 3e-14 seq1187548 91.5 1e-13 seq215054 91.5 1e-13 seq197271 91.5 1e-13 seq1946777 89.7 4e-13 seq990654 86.0 5e-12 seq329421 86.0 5e-12 seq3343411 84.2 2e-11 seq1564730 84.2 2e-11 >seq4952844 Length=1519 Score = 118 bits (130), Expect = 9e-22 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 24018 GGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAG 24077 || ||| | ||||| | ||||| || ||| |||||||||||| | || || ||| Sbjct 23 GGTAAAACCATTACTTTGGAAGTTGAACCCAGTGACACCATCGAGAATGTGAAGGCAAAA 82 Query 24078 ATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAA 24137 ||| || ||||||||||| || || ||||||||| | || |||| | || ||||| Sbjct 83 ATTCAAGATAAAGAAGGCATTCCACCTGATCAACAGCGTCTCATTTTTGCTGGAAAGCAG 142 Query 24138 CTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTA 24197 | ||||||| ||||| || |||||||| ||||| |||||||| ||| ||||| | Sbjct 143 TTGGAAGATGGCAGAACACTCTCAGATTATAATATTCAGAAAGAATCCACACTTCATCTT 202 Query 24198 GTGTTAAGATTGAGAGGAGG 24217 || | || |||||||||| Sbjct 203 GTCCTCAGGCTGAGAGGAGG 222 >seq1107188 Length=1186 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 24084 GACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAA 24143 || ||||||||||| || || || |||||| | || |||| | || ||||| | ||| Sbjct 316 GATAAAGAAGGCATTCCACCTGACCAACAGCGTCTCATTTTTGCTGGAAAGCAGTTGGAA 375 Query 24144 GATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTA 24203 |||| ||||| || |||||||| ||||| |||||||| ||| ||||| | || || Sbjct 376 GATGGCAGAACACTCTCAGATTATAATATTCAGAAAGAATCCACACTTCATCTTGTCTTT 435 Query 24204 AGATTGAGAGGAGG 24217 || |||||||||| Sbjct 436 AGGCTGAGAGGAGG 449 >seq1187548 Length=1734 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | ||||| || ||| | ||||| ||| | || || | ||||| || | | Sbjct 1515 AATGCAGATCTTTGTGAAGACACTGACTGGTAAAACAATAACTCTTGAAGTGGAACCAAG 1574 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| || || | || || |||||| || ||||||||||| || || ||||| Sbjct 1575 TGACACAATTGAAAATGTGAAGGCTAAGATTCAGGATAAAGAAGGCATTCCCCCAGATCA 1634 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 |||||||||||| | | || || || | ||||||| | | | | |||||||| Sbjct 1635 ACAGAGACTGATCTTTGCTGGAAAACAGTTGGAAGATGGACGCACCTTGTCTGATTATAA 1694 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||||||||||| || || | ||||| || Sbjct 1695 TATTCAAAAAGAGTCCACTTTGCATTTGGT 1724 >seq215054 Length=1089 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || || ||||| || | |||||| | ||||| || | | Sbjct 838 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACTATTACCCTTGAAGTGGAACCTAGT 779 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | || ||| || || || ||||||||||| || || |||||| Sbjct 778 GACACAATTGAAAATGTAAAAGCTAAAATCCAAGATAAAGAAGGCATTCCCCCTGATCAA 719 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| || || | | ||||| || || || |||| | | | || || |||||| Sbjct 718 CAGAGGCTTATATTTGCGGGCAAACAGCTAGAGGATGGACGTACCCTCTCAGACTATAAC 659 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATT 24208 || ||||| ||||| ||| ||||| | || || || || Sbjct 658 ATCCAAAAGGAATCAACACTTCATCTGGTCTTGAGGTT 621 >seq197271 Length=6114 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 24018 GGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAG 24077 || ||| | ||||| | ||||| || ||| ||||| || || | || || ||| Sbjct 1388 GGTAAAACCATTACTTTGGAAGTTGAACCCAGTGACACTATAGAAAACGTGAAGGCAAAA 1447 Query 24078 ATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAA 24137 ||| || ||||||||||| || || ||||| || | || |||| | || || || Sbjct 1448 ATTCAAGATAAAGAAGGCATTCCACCTGATCAGCAACGTCTCATTTTTGCAGGAAAACAG 1507 Query 24138 CTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTA 24197 | ||||||| ||||| || ||||| || ||||| ||||||||||| ||||| | Sbjct 1508 TTGGAAGATGGCAGAACACTCTCTGATTACAATATTCAGAAAGAATCTACTCTTCATCTT 1567 Query 24198 GTGTTAAGATTGAGAGGAGG 24217 || | ||| |||||||||| Sbjct 1568 GTCCTCAGACTGAGAGGAGG 1587 >seq1946777 Length=225 Score = 89.7 bits (98), Expect = 4e-13 Identities = 143/201 (71%), Gaps = 6/201 (3%) Strand=Plus/Minus Query 23984 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGA 24043 ||| || |||||| ||||||| ||||| || | || ||| || | || || || ||| Sbjct 198 AAAGAATATGCAATTGTTTGTTAAAACGTTGTCAGGTAAAACGGTAACTATAGATTGCGA 139 Query 24044 GGCCAACGACACCAT--CGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCT 24101 | ||||| |||| | || || ||| |||||||| | |||||||| || || Sbjct 138 ATCTAACGATTCCATTTCCAGG--GTAAAAGAAAAGATTCAACAGAAAGAAGGAATTCCG 81 Query 24102 CCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC 24161 ||||| ||||||||||| || | || ||| || ||||| ||| ||||| | || | | | Sbjct 80 CCCGAACAACAGAGACTTATATTCGCCGGTAAACAACTGGAAAATGACCG-CACTTTATC 22 Query 24162 -GATTATAACATTCAAAAAGA 24181 || || |||||| | ||||| Sbjct 21 GGACTACAACATTAATAAAGA 1 >seq990654 Length=1195 Score = 86.0 bits (94), Expect = 5e-12 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 24018 GGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAG 24077 || ||| | ||||| | ||||| || ||| ||||| || ||| | || || ||| Sbjct 987 GGTAAAACCATTACTCTTGAAGTGGAACCCAGTGACACTATTGAGAATGTGAAGGCAAAA 1046 Query 24078 ATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAA 24137 ||| || ||||||||||| || || ||||| || | || |||| | || ||||| Sbjct 1047 ATTCAAGATAAAGAAGGCATTCCACCTGATCAGCAACGTCTTATTTTTGCTGGAAAGCAG 1106 Query 24138 CTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTA 24197 || ||||||| ||||| || || || || ||||| ||||| || || | ||| | Sbjct 1107 CTGGAAGATGGCAGAACACTCTCAGACTACAATATTCAGAAAGAGTCAACTCTCCATCTT 1166 Query 24198 GTGTTAAGATTGAGAGGAGG 24217 || | ||| |||||||||| Sbjct 1167 GTCCTCAGACTGAGAGGAGG 1186 >seq329421 Length=21321 Score = 86.0 bits (94), Expect = 5e-12 Identities = 119/165 (72%), Gaps = 4/165 (2%) Strand=Plus/Minus Query 24037 AAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCA 24096 |||| ||| | | |||||||| || | ||||| ||||| || || ||||| | Sbjct 18791 AAGTGGAGCCTAGTGACACCATTGAAAATGTCAAGGCTAAGATCCAAGATAAGGAAGGTA 18732 Query 24097 TACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAAC- 24155 | ||||| ||||| ||| | ||||||| | || ||||| || ||||||| | | Sbjct 18731 TTCCTCCTGATCAGCAGCGTCTGATTTTTGCTGGAAAGCAGCTTGAAGATGGTCGCACTC 18672 Query 24156 -GTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||||| |||||||||||||||| |||||||| | |||||||| Sbjct 18671 TGTCAG--ATTATAACATTCAAAAGGAATCTACTCTGCATTTAGT 18629 >seq3343411 Length=310 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24000 TTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATC 24059 ||||| || || ||||||| || | |||||| | ||||| || | | ||||| || Sbjct 309 TTTGTGAAGACTCTAACTGGTAAGACCATTACCCTTGAAGTGGAACCTAGTGACACGATA 250 Query 24060 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTG 24119 || | || ||| || || || ||||||||||| || || ||||| ||||| || Sbjct 249 GAAAATGTAAAAGCTAAAATCCAAGATAAAGAAGGCATTCCCCCAGATCAGCAGAGGCTT 190 Query 24120 ATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAA 24179 || | | ||||| || || || |||| | | | || || |||||||| ||||| Sbjct 189 ATATTTGCAGGCAAACAGCTAGAGGATGGACGCACCCTCTCAGACTATAACATCCAAAAG 130 Query 24180 GAATCTACAATTCATTTAGTGTTAAGATT 24208 ||||| ||| ||||| | || || || || Sbjct 129 GAATCAACACTTCATCTGGTCTTGAGGTT 101 >seq1564730 Length=214 Score = 84.2 bits (92), Expect = 2e-11 Identities = 117/161 (73%), Gaps = 6/161 (4%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | ||||| || ||| ||||||| || | ||||| | ||||| ||| | | Sbjct 53 AATGCAGATCTTTGTGAAGACACTAACTGGCAAGACAATTACATTAGAAGTTGAGCCGAG 112 Query 24050 CGACACCATCGAGCAAGTCAAA--CAAAAGATTACCG-ACAAAGAAGGCATACCTCCCGA 24106 | | ||||| || | || || ||||| ||| | | |||||||| ||||| || || Sbjct 113 CAATACCATTGAAAATGTAAAGGCCAAAA---TACAGGATAAAGAAGGTATACCACCAGA 169 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG 24147 ||| ||||||||||||| | || ||||| || ||||||| Sbjct 170 TCAGCAGAGACTGATTTTTGCAGGAAAGCAGCTTGAAGATG 210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 403807119919125