Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq215054 87.8 1e-12 >seq215054 Length=1089 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/226 (69%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 16712 CCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATG 16771 || |||| ||||| |||| ||| || || || |||||||| ||||| ||||| | | | Sbjct 615 CCACGTAACCTCAAGACCAGATGAAGTGTTGATTCCTTTTGGATGTTATAGTCTGAGAGG 674 Query 16772 GTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACG 16831 || | ||||| | |||||||||||| | ||||||| |||||| || || | | Sbjct 675 GTACGTCCATCCTCTAGCTGTTTGCCCGCAAATATAAGCCTCTGTTGATCAGGGGGAATG 734 Query 16832 CCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTT 16889 || ||||| || || || ||| || || | | | ||||| | || ||| || Sbjct 735 CCTTCTTTATCTTGGATTTTAGCT--TTTACATTTTCAATTGTGTCACTAGGTTCCACTT 792 Query 16890 CCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | | ||| || || || || |||| || || ||||| |||||||| Sbjct 793 CAAGGGTAATAGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380469229359250