Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq28755 122 1e-22 seq326921 118 1e-21 seq70167 114 2e-20 seq438317 113 5e-20 seq17242 104 3e-17 seq4470012 96.9 4e-15 seq2444859 93.3 5e-14 seq780981 89.7 6e-13 seq2861173 86.0 7e-12 seq314876 86.0 7e-12 seq4386908 82.4 9e-11 >seq28755 Length=37593 Score = 122 bits (134), Expect = 1e-22 Identities = 279/413 (68%), Gaps = 13/413 (3%) Strand=Plus/Minus Query 80592 TTTTCAGGTAAAAGTACAGAATTAATTAGACGAGTTACACGTTATCAAATAGCTCAATAT 80651 || || ||||||| || ||||||||| | || | | |||||||||||| || || || Sbjct 16043 TTCTCCGGTAAAACCACCGAATTAATTCGGAGAATAAAACGTTATCAAATTGCA-AAGAT 15985 Query 80652 -AAATGCGTGACTATAAAATATTCTAACGATAATAGATACGG---AACGGGACTATGGAC 80707 |||||| | | || || |||| |||| ||||||||||| | || | | || | Sbjct 15984 GAAATGCCTTATTAGAAGATATGCTAATGATAATAGATATAGCTCAAATGCATTAG---C 15928 Query 80708 ACATGATA-AGAATAATTTTGAAGCATTGGAAGCAACTAAACTATGTGATGTCTTGGAAG 80766 |||||| | || | ||| | ||| | || || ||| || | || | || | | Sbjct 15927 ACATGACGGACAAACACTTTCA-GCAATTTCCGCTACAAAATTAATTTATTTAATGCACG 15869 Query 80767 CAATTACAGATTTCTCCGTGATAGGTATTGATGAAGGACAGTTCTTTCCAGACATTGTTG 80826 || | ||| | || ||||| || |||| |||||| |||||||||||||| Sbjct 15868 TTATGA---ATTATGATATTATCGGTATAGACGAAGCACAGTTTTTTCCAGACATTGTAA 15812 Query 80827 AATTCTGTGAGCGTATGGCAAACGAAGGAAAAATAGTTATAGTAGCCGCACTCGATGGTA 80886 || || ||||| || ||||||||||| |||| | ||| || |||| | Sbjct 15811 CGTTTGCAGAAGAAATGGCCAATCAAGGAAAAATAATTATCATTGCCTGTCTAAATGGAA 15752 Query 80887 CATTTCAACGTAAACCGTTTAATAATATCTTGGATCTTATTCCATTATCTGAAATGGTGG 80946 |||||| | | || | || ||||||||| |||| ||||||||| | |||| |||| Sbjct 15751 CATTTCGAAGAGAAGCTTTCGGAAATATCTTGAATCTAATTCCATTAGCCGAAAGCGTGG 15692 Query 80947 TAAAACTAACTGCAGTGTGTATGAAATGCTTTAAGGAGGCTTCCTTTTCTAAA 80999 ||||| || ||| || |||||| || ||| | |||||||| ||| | ||| Sbjct 15691 TAAAATTATATGCTGTCTGTATGTCGTGTTTTCAAGAGGCTTCGTTTACAAAA 15639 >seq326921 Length=5948 Score = 118 bits (130), Expect = 1e-21 Identities = 235/344 (68%), Gaps = 18/344 (5%) Strand=Plus/Minus Query 32867 TTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTT 32926 |||||| | |||| || |||| |||||||| | | |||| | ||||| Sbjct 5168 TTTTACGTACGGCAACGTTTCTACGGCATTAAATGAAAACAATTTTACGACTTTATCTCG 5109 Query 32927 AACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTG 32986 || |||||||||| | | |||||| ||||| || |||||||| ||||| || || |||| Sbjct 5108 AATATATGTATCATTAAGAAGACTGTACATCTCTGAATGAATATTTTCTATAGC-ATTTT 5050 Query 32987 AAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAA-AATCGTTCTGCTA 33045 ||| | ||| || || ||| ||||||| ||| | ||||||||| ||| Sbjct 5049 AAAAC-------GCACTGTGCTTCAAGAATTTGTACTT-TGTGAATGAATCGTTCTACTA 4998 Query 33046 AATTTT-CATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 33104 |||||| || |||||||||| ||||| ||||||||||| | || | | ||| || ||| Sbjct 4997 AATTTTTCACTCACTATTCCATCACTAGCTGCAAAAAATGTTAAAATGTATTTAATGAAA 4938 Query 33105 TATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCT 33164 || | ||| | || |||| | ||||| || ||| | ||| |||||| Sbjct 4937 TACTGTTCATTGACCGTAAGTTGTTCCCAATGAT-------TTTTCCCAAATCAACTTCT 4885 Query 33165 TCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCA 33208 || || |||||||| | || | || || |||||||| |||| Sbjct 4884 TCTACAGTCCAAAAGAAAGCAACAGCTTTCTTATACATGGTCCA 4841 >seq70167 Length=66857 Score = 114 bits (126), Expect = 2e-20 Identities = 102/128 (80%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 62801 ATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTG 62860 || || || || |||||||| ||||||||||||||||| ||||| ||||| || | Sbjct 49987 ATTTCTGTACATAGATTACTGCACTTGATGGTTCCTAAGTTTTGCTGATTTGATTTACGG 50046 Query 62861 TTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATC 62920 ||||| ||||| ||||| || ||| | ||||| ||||||||||||||||| || ||||| Sbjct 50047 TTACATGCATCTTTATAGAGCATGTAAGGAGTGCCAGTTTCAATCTGAGAGTCAATAATG 50106 Query 62921 GCTTTCCA 62928 || | ||| Sbjct 50107 GCATACCA 50114 Score = 86.0 bits (94), Expect = 7e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 62191 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 62250 ||| ||||| |||||||| |||||||| || | || | ||| || || || || || | Sbjct 30007 TACCTGAAACTCTCCAGATAATACTCTTCGGATATAGAAATTGCTAGTGTATGGCTCAAT 30066 Query 62251 AGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 62310 ||||||||||||||| | ||| || ||||| || || || ||||| || || | | || Sbjct 30067 AGACTCATTATTTCCAAGAATCTGTGCAGTCGAAGCTGTTGGCATTGGAGCTATTAGCAA 30126 Query 62311 ACTATTTCTAAGACC 62325 ||| || || | ||| Sbjct 30127 ACTGTTCCTTACACC 30141 >seq438317 Length=14545 Score = 113 bits (124), Expect = 5e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 33047 ATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATA 33106 ||||||||| || || || ||||| || |||||||| || | | ||| || |||| Sbjct 3418 ATTTTCATTAACAATACCATCACTAGCAGCAAAAAAGGCTAGGATATGCGAAATGAAATG 3477 Query 33107 TTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTC 33166 |||| | | ||| ||| ||| ||| | |||||| || | |||||||||||| Sbjct 3478 CCTTTCTGTAGATTTTAATTTCCCCCAGTCAGCTAAATCTTTTGAGAGATCCACTTCTTC 3537 Query 33167 CACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAAT 33226 | |||||||||||||| |||||||| || ||||| | ||| || ||| |||| | || Sbjct 3538 AGCAGTCCAAAATGATGCTTCTGCCTTCTTGTACATTTGCCAAATATCAGGATACTCGAT 3597 Query 33227 TGGAAAAATAACAAATC 33243 || ||||| ||||||| Sbjct 3598 GGGGAAAATTACAAATC 3614 >seq17242 Length=2525 Score = 104 bits (114), Expect = 3e-17 Identities = 154/218 (71%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 32688 TCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGC 32747 || ||||| || | ||| || || || || || ||||| || || | || |||||| Sbjct 2213 TCCCTACTGATAAGTTCATTACTGAAGGTAAGACCTGGCATAAGTCCTCTTTTCTTAAGC 2154 Query 32748 CAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATA 32807 |||||||| |||||||| || ||||| |||||||||||||| || || ||||| ||| Sbjct 2153 CAAAATATTGACGCAAAGGAACCAGAGAAGAAAATTCCTTCAACAGCAGCAAAAGCAGCT 2094 Query 32808 AGTCTCTCTCCATAACCGGC---GCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTC 32864 | ||| || ||| | || ||| || ||||| || ||||||| | |||||| Sbjct 2093 ACTCTTTCACCAAATGATGCATTAGTGTGATTAATCCAGTTCAAAGCCCAAACAGCCTTC 2034 Query 32865 TTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 32902 || || | ||| || | || || || ||||| || || Sbjct 2033 TTCTTAATACATGGGAGAGTTTCAATGGCATTGAACAG 1996 >seq4470012 Length=581 Score = 96.9 bits (106), Expect = 4e-15 Identities = 102/132 (77%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 80559 GGCGGACATATTCAGTTGATAATCGGCCCCATGTTTTCAGGTAAAAGTACAGAATTAATT 80618 || ||||| || || | ||| |||| | ||||||||| || |||| |||||||||||| Sbjct 117 GGAGGACAAATCCAAATTATATTCGGACTCATGTTTTCTGGAAAAACGACAGAATTAATT 176 Query 80619 AGACGAGTTACACGTTATCAAATAGCTCAAT-ATAAATGCGTGACTATAAAATATTCTAA 80677 | ||| | | ||| |||||||| | | ||| |||| ||| | | ||||||||| || | Sbjct 177 CGGCGATTGAAACGGTATCAAATTG-TAAATCATAAGTGCCTAATTATAAAATACGCTCA 235 Query 80678 CGATAATAGATA 80689 |||||||||||| Sbjct 236 CGATAATAGATA 247 >seq2444859 Length=247 Score = 93.3 bits (102), Expect = 5e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 61925 TAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGAT 61984 ||||| |||||||| || ||||| |||| | || || || ||||| | ||||| ||| Sbjct 246 TAAAAGTGCATACTTGTGAGTTTTCCATAATTTGGTTCAGCAATATGTACATTCAGAGAC 187 Query 61985 TGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGA 62044 || |||||||| || | || || | ||| || |||||||| | || | ||||||||| Sbjct 186 TGGCTTTGATCAATATAAGCACCACGGTCAGCGGCCATTTTCAAAACATTTTTTTGTGGA 127 Query 62045 ATTTCCCAAATAGT 62058 |||||||| | ||| Sbjct 126 ATTTCCCATACAGT 113 >seq780981 Length=1727 Score = 89.7 bits (98), Expect = 6e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 32683 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 32742 |||| || ||||| || | ||| || || || || || ||||| || || | || | Sbjct 148 CCTCATCCCTACTGATAAGTTCATTACTGAAGGTAAGACCTGGCATAAGTCCTCTTTTCT 89 Query 32743 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 32802 ||||||||||||| || ||||| || ||||| |||||||||||||| || || ||||| | Sbjct 88 TAAGCCAAAATATTGATGCAAAGGAACCAGAGAAGAAAATTCCTTCAACAGCAGCAAAAG 29 Query 32803 CA 32804 || Sbjct 28 CA 27 >seq2861173 Length=269 Score = 86.0 bits (94), Expect = 7e-12 Identities = 146/209 (70%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 80792 TATTGATGAAGGACAGTTCTTTCCAGACATTGTTGAATTCTG-TGAGCGTATGGCAAACG 80850 ||| ||||||| |||||| ||||||||||| | ||| | || ||| ||||| || Sbjct 269 TATAGATGAAGCACAGTTTTTTCCAGACATCG-TGACGTTTGCTGAAGAAATGGCCAATC 211 Query 80851 AAGGAAAAATAGTTATAGTAGCCGCACTCGATGGTACATTTCAACGTAAACCGTTTAATA 80910 |||||||||| |||| | ||| || | || || |||| | | ||| | || | Sbjct 210 AAGGAAAAATTATTATTATTGCCTGTCTAAACGGAACTTTTCGAAGAAAAGCTTTCGGAA 151 Query 80911 ATATCTTGGATCTTATTCCATTATCTGAAATGGTGGTAAAACTAACTGCAGTGTGTATGA 80970 |||| || || | ||||| ||| | |||| ||||||||| || ||| || |||||| Sbjct 150 ATATTTTACATTTAATTCCGTTAGCCGAAAACGTGGTAAAATTACATGCTGTTTGTATGT 91 Query 80971 AATGCTTTAAGGAGGCTTCCTTTTCTAAA 80999 || ||| | || ||||| ||| | ||| Sbjct 90 CGTGTTTTCAAGAAGCTTCATTTACAAAA 62 >seq314876 Length=46846 Score = 86.0 bits (94), Expect = 7e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 80787 ATAGGTATTGATGAAGGACAGTTCTTTCCAGACATTGTTGAATTCTG-TGAGCGTATGGC 80845 || ||||| || |||| |||||| ||||||||||| || || | || ||| ||||| Sbjct 32830 ATCGGTATAGACGAAGCACAGTTTTTTCCAGACATCGT-GACGTTTGCTGAAGAAATGGC 32888 Query 80846 AAACGAAGGAAAAATAGTTATAGTAGCCGCACTCGATGGTACATTTCAACGTAAACCGTT 80905 || ||||||||||| |||| | ||| | || || || |||| | | || | || Sbjct 32889 CAATCAAGGAAAAATAATTATCATTGCCTGTTTAGACGGAACTTTTCGAAGAGAAGCTTT 32948 Query 80906 TAATAATATCTTGGATCTTATTCCATTATCTGAAATGGTGGTAAAACTAACTGCAGTGTG 80965 ||||||||| || | ||||| ||| | |||| ||||||||| || ||| || | Sbjct 32949 CGGAAATATCTTGCATTTAATTCCGTTAGCCGAAAGCGTGGTAAAATTATATGCTGTCTA 33008 Query 80966 TATGAAATGCTTTAAGGAGGCTTCCTTTTCTAAA 80999 |||| | ||| | || ||||| ||| | ||| Sbjct 33009 TATGTCGCGTTTTCAAGAAGCTTCATTTACAAAA 33042 >seq4386908 Length=540 Score = 82.4 bits (90), Expect = 9e-11 Identities = 80/103 (78%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 80587 CCATGTTTTCAGGTAAAAGTACAGAATTAATTAGACGAGTTACACGTTATCAAATAGCTC 80646 |||||||||| || || | |||||||||||| | ||| | | ||| |||||||| || Sbjct 291 CCATGTTTTCTGGAAATACGACAGAATTAATTCGGCGATTGAAACGGTATCAAATTGCAA 350 Query 80647 AATATAAATGCGTGACTATAAAATATTCTAACGATAATAGATA 80689 | |||||| | | | ||||||||| || ||||||||||||| Sbjct 351 ATCATAAATACCTAATTATAAAATACGCTCACGATAATAGATA 393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594136331370000