Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1187548 147 2e-30 seq4952844 132 4e-26 seq197271 118 9e-22 seq1107188 116 3e-21 seq990654 114 1e-20 seq21712 100 2e-16 seq4730498 93.3 3e-14 seq635387 87.8 1e-12 seq2837514 84.2 2e-11 >seq1187548 Length=1734 Score = 147 bits (162), Expect = 2e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 24995 AACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTC 25054 ||| |||||||| ||||| || || | || || || |||||||| | || ||||| | Sbjct 381 AACCATGCAAATCTTTGTTAAAACACTCACTGGCAAGACCATCACACTTGAGGTGGAACC 440 Query 25055 GTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 |||||| || || ||||| |||||| || |||||||| ||||||||||| Sbjct 441 AAGTGACACAATAGAAAATGTGAAGGCTAAAATCCAGGATAAAGAAGGAATTCCACCTGA 500 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||||||| || | |||||||| |||||||| || ||||||| ||||| || ||||| Sbjct 501 CCAACAGAGGCTGATTTTTGCTGGCAAACAGTTGGAAGATGGACGCACCTTGTCTGATTA 560 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||||||||||| ||||| | ||||| || || Sbjct 561 TAATATTCAAAAAGAGTCCACTTTGCATTTGGTCCT 596 Score = 120 bits (132), Expect = 2e-22 Identities = 160/220 (73%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 24992 CGGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGA 25051 |||| |||||| || ||||| ||||| |||| |||||| | || || | |||||||| Sbjct 1509 CGGAGGAATGCAGATCTTTGTGAAGACACTGACTGGTAAAACAATAACTCTTGAAGTGGA 1568 Query 25052 GTCGTCTGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCAC 25110 | |||||| || || ||||| | || | ||| || |||||||| ||||| | Sbjct 1569 ACCAAGTGACACAATTGAAAATGTGAAGGCTAAGATTCAG-GATAAAGAAGGCATTCCCC 1627 Query 25111 CTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCG 25170 | || |||||| | | || ||||| || ||||| || ||||||| ||||| || | Sbjct 1628 CAGATCAACAGAGACTGATCTTTGCTGGAAAACAGTTGGAAGATGGACGCACCTTGTCTG 1687 Query 25171 ATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||| |||||||||||||| ||||| | ||||| || || Sbjct 1688 ATTATAATATTCAAAAAGAGTCCACTTTGCATTTGGTCCT 1727 >seq4952844 Length=1519 Score = 132 bits (146), Expect = 4e-26 Identities = 155/207 (75%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 25026 GGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAG-CAAAA 25084 |||||| |||| || | ||||| || | |||||| |||||| ||||| ||||| Sbjct 23 GGTAAAACCATTACTTTGGAAGTTGAACCCAGTGACACCATCGAGAATGTGAAGGCAAAA 82 Query 25085 AATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACA 25144 | ||| || |||||||| ||||||||||| |||||||| | |||||||| || || || Sbjct 83 ATTCAA-GATAAAGAAGGCATTCCACCTGATCAACAGCGTCTCATTTTTGCTGGAAAGCA 141 Query 25145 ATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTT 25204 || ||||||| | || | ||||| |||||||| ||||||||||| || ||| | Sbjct 142 GTTGGAAGATGGCAGAACACTCTCAGATTATAATATTCAGAAAGAATCCACACTTCATCT 201 Query 25205 AGTGCTAAGGCTAAGAGGAGGAAATTA 25231 || || ||||| |||||||| || || Sbjct 202 TGTCCTCAGGCTGAGAGGAGGCAACTA 228 >seq197271 Length=6114 Score = 118 bits (130), Expect = 9e-22 Identities = 152/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 25026 GGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAG-CAAAA 25084 |||||| |||| || | ||||| || | ||||||||| || ||||| ||||| Sbjct 1388 GGTAAAACCATTACTTTGGAAGTTGAACCCAGTGACACTATAGAAAACGTGAAGGCAAAA 1447 Query 25085 AATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACA 25144 | ||| || |||||||| ||||||||||| || || || | |||||||| || ||||| Sbjct 1448 ATTCAA-GATAAAGAAGGCATTCCACCTGATCAGCAACGTCTCATTTTTGCAGGAAAACA 1506 Query 25145 ATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTT 25204 || ||||||| | || | |||||||||||||| |||||||| || || ||| | Sbjct 1507 GTTGGAAGATGGCAGAACACTCTCTGATTACAATATTCAGAAAGAATCTACTCTTCATCT 1566 Query 25205 AGTGCTAAGGCTAAGAGGAGGAAATTA 25231 || || || || |||||||| || || Sbjct 1567 TGTCCTCAGACTGAGAGGAGGCAACTA 1593 >seq1107188 Length=1186 Score = 116 bits (128), Expect = 3e-21 Identities = 122/158 (77%), Gaps = 2/158 (1%) Strand=Plus/Plus Query 25075 TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTT 25133 ||||| |||||| ||| || |||||||| |||||||||||||||||||| | |||||| Sbjct 299 TGAAGGCAAAAATTCAA-GATAAAGAAGGCATTCCACCTGACCAACAGCGTCTCATTTTT 357 Query 25134 GCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCC 25193 || || || || || ||||||| | || | ||||| |||||||| ||||||||| Sbjct 358 GCTGGAAAGCAGTTGGAAGATGGCAGAACACTCTCAGATTATAATATTCAGAAAGAATCC 417 Query 25194 ACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTA 25231 || || ||| | || | ||||| |||||||| || || Sbjct 418 ACACTTCATCTTGTCTTTAGGCTGAGAGGAGGCAACTA 455 >seq990654 Length=1195 Score = 114 bits (126), Expect = 1e-20 Identities = 151/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 25026 GGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAG-CAAAA 25084 |||||| |||| || | |||||||| | ||||||||| ||| ||||| ||||| Sbjct 987 GGTAAAACCATTACTCTTGAAGTGGAACCCAGTGACACTATTGAGAATGTGAAGGCAAAA 1046 Query 25085 AATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACA 25144 | ||| || |||||||| ||||||||||| || || || |||||||||| || || || Sbjct 1047 ATTCAA-GATAAAGAAGGCATTCCACCTGATCAGCAACGTCTTATTTTTGCTGGAAAGCA 1105 Query 25145 ATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTT 25204 | ||||||| | || | || ||||||||||| ||||| || || || ||| | Sbjct 1106 GCTGGAAGATGGCAGAACACTCTCAGACTACAATATTCAGAAAGAGTCAACTCTCCATCT 1165 Query 25205 AGTGCTAAGGCTAAGAGGAGGAAATTA 25231 || || || || |||||||| || || Sbjct 1166 TGTCCTCAGACTGAGAGGAGGCAACTA 1192 >seq21712 Length=99785 Score = 100 bits (110), Expect = 2e-16 Identities = 167/238 (70%), Gaps = 10/238 (4%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || || || |||||| |||| || | ||||| || | | Sbjct 91071 ATGCAGATCTTCGTCAAAACCCCTACAGGTAAAACCATTACTTTGGAAGTTGAACCCAGT 91130 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||||| || ||||| |||||| ||| || |||||||| ||||||||||| || Sbjct 91131 GACACTATTGAAAACGTGAAGACAAAAATTCAA-GAAAAAGAAGGCATTCCACCTGATCA 91189 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGAT----GATCGCACTGTGGGCGATT 25173 || || | | |||||| || || || || ||| || |||| | || | |||| Sbjct 91190 GCAACGTCTCAGTTTTGCTGGAAAGCAGTTGGAAAATGGCAGATCACTCTCT----GATT 91245 Query 25174 ACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTA 25231 |||||||||| |||||| | || || ||| | || || | || |||||||| || || Sbjct 91246 ACAATATTCAGAAAGAAACTACTCTTCATCTTGTCCTCCGACTGAGAGGAGGCAACTA 91303 >seq4730498 Length=794 Score = 93.3 bits (102), Expect = 3e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| || || | || || ||| ||||||| | || || || | ||| Sbjct 675 ATGCAGATTTTTGTGAAAACCCTCACAGGGAAAACCATCACCCTAGAGGTTGAACCTTCT 616 Query 25059 GACACTA-TCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || | | || | ||||||||| ||| ||||||||||| |||| ||||| || Sbjct 615 GATACAAATGGAAACGTGAAAGCAAAAATTCAG-GACAAAGAAGGCATTCTTCCTGATCA 557 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | |||||| | || || ||||| ||||||| |||||| | || ||||| Sbjct 556 GCAGCGCTTGATTTTTTCTGGAAAGCAATTCGAAGATGGTCGCACACTTTCTGACTACAA 497 Query 25178 TATTCAAAAAGAATCCAC 25195 ||||| || || || || Sbjct 496 CATTCAGAAGGAGTCAAC 479 >seq635387 Length=26226 Score = 87.8 bits (96), Expect = 1e-12 Identities = 128/177 (72%), Gaps = 8/177 (5%) Strand=Plus/Plus Query 25058 TGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||||||| ||| ||||| |||||| ||| || |||| ||| |||||| |||| | Sbjct 16870 TGACACTATTGAGAATGTGAAGGCAAAAATTCAA-GATAAAGCAGGCATTCCATCTGATC 16928 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCG--CACTGTGGGCGATTA 25174 | ||||| |||||| ||| || || ||| | ||||||| | |||| || | || Sbjct 16929 AGCAGCGTCTTATTTCTGCTGGAAAGCAACTGGAAGATGGCAGAACACTCTG----ACTA 16984 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTA 25231 ||||||||| ||||| || || || | | | || || || || ||| |||| || || Sbjct 16985 CAATATTCAGAAAGAGTCAACTCTCCGTCTTGTCCTCAGACTGAGAAGAGGCAACTA 17041 >seq2837514 Length=268 Score = 84.2 bits (92), Expect = 2e-11 Identities = 140/201 (70%), Gaps = 1/201 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||||||||||||||| |||| || || | || || | ||||||||| | | Sbjct 202 ATGCAAATATTTGTAAAGACCCTGACTGGCAAGACAATAACCCTGGAAGTGGAGACTAGT 143 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || | ||| || ||| || || ||||| || || ||||| || Sbjct 142 GACACCATTGAAAATGTCAAGGCTAAGATCCAAGATAAGGAAGGCATCCCTCCTGATCAG 83 Query 25119 CAGCGGATTA-TTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 || || | | ||||||| || |||||| | ||||||| || || | || ||||| Sbjct 82 CAACGTCTGATTTTTTGCAGGGAAACAACTGGAAGATGGCCGAACACTTTCTGACTACAA 23 Query 25178 TATTCAAAAAGAATCCACGCT 25198 || || || |||||||| || Sbjct 22 CATCCAGAAGGAATCCACCCT 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406992974908625