Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq17242 84.2 4e-11 >seq17242 Length=2525 Score = 84.2 bits (92), Expect = 4e-11 Identities = 152/220 (69%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 42608 GCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAA 42667 ||||||||| ||||| || || | || || || ||||||||||| | ||||| | || Sbjct 1995 GCTGTTCAATGCCATTGAAACTCTCCCATGTATTAAGAAGAAGGCTGTTTGGGCTTTGAA 2054 Query 42668 CTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGA 42727 |||||| | | | ||| | || || || || | | || ||| | || || || Sbjct 2055 CTGGATTAATCACACTAATGCATCATTTGGTGAAAGAGTAGCTGCTTTTGCTGCTGTTGA 2114 Query 42728 GGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGA 42786 || || |||||||| || |||| || || || || ||||| ||| | | ||| | | Sbjct 2115 AGGAATTTTCTTCTCTGGTTCCTTTGCGTCAATATTTTGGCTTAAGAAAAGAGGACT-TA 2173 Query 42787 TGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGA 42826 |||| || || |||||| || ||||| ||||| ||||| Sbjct 2174 TGCCAGGTCTTACCTTCAGTAATGAACTTATCAGTAGGGA 2213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 885476471922000