Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq4730498 96.9 3e-15 seq47141 84.2 2e-11 >seq4730498 Length=794 Score = 96.9 bits (106), Expect = 3e-15 Identities = 144/200 (72%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG--TCCTCGAGTTGTTTACC 138476 |||||||||| |||||||||||||| | ||| |||| || |||| ||| || || Sbjct 480 TTGACTCCTTCTGAATGTTGTAGTCAG--AAAGTGTGCGACCATCTTCGAATTGCTTTCC 537 Query 138477 GGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTT 138536 ||| | || | ||||| || || ||| | || ||||||||||| ||| |||||| || Sbjct 538 AGAAAAAATCAAGCGCTGCTGATCAGGAAGAATGCCTTCTTTGTCC-TGAATTTTTGCTT 596 Query 138537 TAATTGTTCCACG-GTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAG 138595 | | ||||| || || | | || ||||| | || | ||||| || || || | Sbjct 597 TCACGTTTCCATTTGTATCAGAAGGTTCAACCTCTAGGGTGATGGTTTTCCCTGTGAGGG 656 Query 138596 TTTTTACAAAAATCTGCATG 138615 |||| ||||||||||||||| Sbjct 657 TTTTCACAAAAATCTGCATG 676 >seq47141 Length=13405 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/202 (71%), Gaps = 8/202 (4%) Strand=Plus/Plus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG--TCCTCGAGTTGTTTACC 138476 |||||||||| |||||||||||||| | ||| |||| || || ||||| || || Sbjct 4974 TTGACTCCTTCTGAATGTTGTAGTCAG--AAAGTGTGCGACCATCTTCAAGTTGCTTTCC 5031 Query 138477 GGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTT 138536 | | | || | ||||| || | ||||| || ||||| ||| | ||| ||||| || Sbjct 5032 AGCAAAAATCAAGCGCTGCTGATTAGGAGGAATGCCTTCCTTG-CTTTGAATTTTTACTT 5090 Query 138537 TA--ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGA 138594 | ||| ||| | || |||| | || ||||| | || | ||||| || || || Sbjct 5091 TCCCATT-TTCAATTGTATCGGAAGGTTCAACCTCTAGGGTGATGGTTTTCCCTGTGAGG 5149 Query 138595 GTTTTTACAAAAATCTGCATGG 138616 ||||| |||||||||||||||| Sbjct 5150 GTTTTCACAAAAATCTGCATGG 5171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 465329279034000