Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq1187548 107 2e-18 seq329421 96.9 3e-15 seq47141 93.3 4e-14 seq4730498 86.0 6e-12 >seq1187548 Length=1734 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||||||| | || ||||||||||||||||| ||||| || ||||| ||| || Sbjct 1724 ACCAAATGCAAAGTGGACTCTTTTTGAATATTATAATCAGACAAGGTGCGTCCATCTTCC 1665 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 | |||||||||||| |||||| || ||| ||||| || || ||||| || || ||| Sbjct 1664 AACTGTTTTCCAGCAAAGATCAGTCTCTGTTGATCTGGGGGAATGCCTTCTTTATCCTGA 1605 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 || || ||| | | ||| | ||||| | || ||||| | || | ||||| Sbjct 1604 ATCTTAGCCTTCACATTTTCAATTGTGTCACTTGGTTCCACTTCAAGAGTTATTGTTTTA 1545 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || ||||| || || ||||| |||||||| Sbjct 1544 CCAGTCAGTGTCTTCACAAAGATCTGCAT 1516 Score = 87.8 bits (96), Expect = 2e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||||||| | || ||||||||||||||||| ||||| || ||||| ||| || Sbjct 593 ACCAAATGCAAAGTGGACTCTTTTTGAATATTATAATCAGACAAGGTGCGTCCATCTTCC 534 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 | |||||| ||||| | |||| | ||| || || || || || || || || ||| | Sbjct 533 AACTGTTTGCCAGCAAAAATCAGCCTCTGTTGGTCAGGTGGAATTCCTTCTTTATCCTGG 474 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 ||||| ||| | | ||| | ||||| | || || || | || | || ||| Sbjct 473 ATTTTAGCCTTCACATTTTCTATTGTGTCACTTGGTTCCACCTCAAGTGTGATGGTCTTG 414 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCATGG 127115 || || || ||||| ||||| || ||||||| Sbjct 413 CCAGTGAGTGTTTTAACAAAGATTTGCATGG 383 >seq329421 Length=21321 Score = 96.9 bits (106), Expect = 3e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| || ||||| | ||||| || |||||||| || ||||| | Sbjct 18611 CCACCACGCAGACGCAGTACTAAATGCAGAGTAGATTCCTTTTGAATGTTATAATCTGAC 18670 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| |||||||| | |||| ||||||||||| ||||| Sbjct 18671 AGAGTGCGACCATCTTCAAGCTGCTTTCCAGCAAAAATCAGACGCTGCTGATCAGGAGGA 18730 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || ||||| || ||| || ||||| | ||| | |||||| || ||| ||| Sbjct 18731 ATACCTTCCTTATCTTGGATCTTAGCCTTGACATTTTCAATGGTGTCACTAGGCTCCACT 18790 Query 127067 T 127067 | Sbjct 18791 T 18791 >seq47141 Length=13405 Score = 93.3 bits (102), Expect = 4e-14 Identities = 142/200 (71%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || ||||| ||||| || | |||||| ||| || || || |||||| Sbjct 4973 GTTGACTCCTTCTGAATGTTGTAGTCAGAAAGTGTGCGACCATCTTCAAGTTGCTTTCCA 5032 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || | ||||| |||||||||| ||||| ||||| |||||| | ||| ||| | ||| Sbjct 5033 GCAAAAATCAAGCGCTGCTGATTAGGAGGAATGCCTTCCTTG-CTTTGAATTTTTACTTT 5091 Query 127037 AGT-TGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | ||| | || || | | || || || | ||| | ||||| || || || || Sbjct 5092 CCCATTTTCAATTGTATCGGAAGGTTCAACCTCTAGGGTGATGGTTTTCCCTGTGAGGGT 5151 Query 127096 TTTTACAAAAATCTGCATGG 127115 ||| |||||||||||||||| Sbjct 5152 TTTCACAAAAATCTGCATGG 5171 >seq4730498 Length=794 Score = 86.0 bits (94), Expect = 6e-12 Identities = 140/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || ||||| ||||| || | |||||| ||| || | || |||||| Sbjct 479 GTTGACTCCTTCTGAATGTTGTAGTCAGAAAGTGTGCGACCATCTTCGAATTGCTTTCCA 538 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGC-TT 127035 | | ||||| ||||||||||| ||| | ||||| || |||||| ||| ||| ||| || Sbjct 539 GAAAAAATCAAGCGCTGCTGATCAGGAAGAATGCCTTCTTTGTCC-TGAATTTTTGCTTT 597 Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | | | | || || | | || || || | ||| | ||||| || || || || Sbjct 598 CACGTTTCCATTTGTATCAGAAGGTTCAACCTCTAGGGTGATGGTTTTCCCTGTGAGGGT 657 Query 127096 TTTTACAAAAATCTGCATG 127114 ||| ||||||||||||||| Sbjct 658 TTTCACAAAAATCTGCATG 676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445861794978000