Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq3343411 122 7e-23 seq197271 104 2e-17 seq1107188 102 7e-17 seq215054 102 7e-17 seq2976538 95.1 1e-14 seq4952844 93.3 4e-14 seq70167 93.3 4e-14 seq2316783 91.5 1e-13 seq4730498 87.8 2e-12 seq2361161 86.0 5e-12 seq1187548 84.2 2e-11 seq990654 84.2 2e-11 seq47141 82.4 6e-11 >seq3343411 Length=310 Score = 122 bits (134), Expect = 7e-23 Identities = 160/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || | |||||| || ||||| || ||||||||||||||||| ||||| || Sbjct 89 ATGCCACCACGTAACCTCAAGACCAGATGAAGTGTTGATTCCTTTTGGATGTTATAGTCT 148 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || ||| ||| || | ||||| ||||| |||| | | ||||| || || Sbjct 149 GAGAGGGTGCGTCCATCCTCTAGCTGTTTGCCTGCAAATATAAGCCTCTGCTGATCTGGG 208 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 |||||||||||||||||||| ||||| ||| | ||||| ||||| || || Sbjct 209 GGAATGCCTTCTTTATCTTGGATTTTAGCTTTTACATTTTCTATCGTGTCACTAGGTTCC 268 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAA 45332 ||||| || |||| || || || |||||||| || |||||| Sbjct 269 ACTTCAAGGGTAATGGTCTTACCAGTTAGAGTCTTCACAAAA 310 >seq197271 Length=6114 Score = 104 bits (114), Expect = 2e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 ||||| | || || | || ||||| || || ||||| || || ||||| ||||| | Sbjct 1587 CCTCCTCTCAGTCTGAGGACAAGATGAAGAGTAGATTCTTTCTGAATATTGTAATCAGAG 1528 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| | ||| ||||| ||||||||||| | || | |||||||| || || ||| Sbjct 1527 AGTGTTCTGCCATCTTCCAACTGTTTTCCTGCAAAAATGAGACGTTGCTGATCAGGTGGA 1468 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 |||||||||||||||||||||||| || | ||||| ||||| | || ||| Sbjct 1467 ATGCCTTCTTTATCTTGAATTTTTGCCTTCACGTTTTCTATAGTGTCACTGGGTTCAACT 1408 Query 45294 TCGAGAGTAACCGTTTTGCC 45313 || | ||||| ||||| || Sbjct 1407 TCCAAAGTAATGGTTTTACC 1388 >seq1107188 Length=1186 Score = 102 bits (112), Expect = 7e-17 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 ||||| | ||||| || || ||||| || || ||||| || || ||||||||||| | Sbjct 449 CCTCCTCTCAGCCTAAAGACAAGATGAAGTGTGGATTCTTTCTGAATATTATAATCTGAG 390 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| | ||| ||||| || ||||| || | || | || || ||||| || ||| Sbjct 389 AGTGTTCTGCCATCTTCCAACTGCTTTCCAGCAAAAATGAGACGCTGTTGGTCAGGTGGA 330 Query 45234 ATGCCTTCTTTATCTTGAATTTTT 45257 |||||||||||||||||||||||| Sbjct 329 ATGCCTTCTTTATCTTGAATTTTT 306 >seq215054 Length=1089 Score = 102 bits (112), Expect = 7e-17 Identities = 157/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 45117 CCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACG 45176 || || | |||||| || ||||| || ||||||||||||||||| ||||| || || | Sbjct 615 CCACGTAACCTCAAGACCAGATGAAGTGTTGATTCCTTTTGGATGTTATAGTCTGAGAGG 674 Query 45177 GTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATG 45236 || ||| || | ||||| || || |||| | | || || || || |||||| Sbjct 675 GTACGTCCATCCTCTAGCTGTTTGCCCGCAAATATAAGCCTCTGTTGATCAGGGGGAATG 734 Query 45237 CCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCG 45296 |||||||||||||| ||||| ||| | ||| | ||||| || || ||||| Sbjct 735 CCTTCTTTATCTTGGATTTTAGCTTTTACATTTTCAATTGTGTCACTAGGTTCCACTTCA 794 Query 45297 AGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || |||| || ||||| || | || || ||||| || ||||| Sbjct 795 AGGGTAATAGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 838 Score = 91.5 bits (100), Expect = 1e-13 Identities = 168/248 (68%), Gaps = 19/248 (8%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || || | || ||||||||||| || ||||||||||| || ||||| || Sbjct 837 ATACCACCACGCAGACGCAGTACTAGATGCAGAGTAGATTCCTTTTGAATGTTATAGTC- 895 Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 |||| || | || ||| || | || |||||||| | |||| ||||||||||| | Sbjct 896 -TGACAGTGTGCGACCATCTTCAAGCTGCTTTCCTGCAAAAATCAGACGTTGCTGGTCAG 954 Query 45229 GCGGAATGCCTTCTTTATCT---------------TGAATTTTTTGTTTGATCGCTTCTA 45273 | ||||| ||||| |||||| || || || ||||| ||| | Sbjct 955 GAGGAATACCTTCCTTATCTNNNNNNNNNNNNNNNTGGATCTTAGCTTTGACATTTTCGA 1014 Query 45274 CGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAA 45333 ||||| | ||| ||||| ||||| | ||||| || || | ||| || ||||| | Sbjct 1015 TAGTGTCACTTGGCTCTACTTCAAGAGTGATTGTTTTACCTGTCAAAGTCTTCACAAAGA 1074 Query 45334 TTTGCATC 45341 | |||||| Sbjct 1075 TCTGCATC 1082 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244 ||| ||||| || |||||||| | |||| ||||||||||| ||||| || |||||||| Sbjct 215 ATCTTCCAACTGCTTTCCTGCAAAAATCAGACGTTGCTGGTCTGGCGGTATACCTTCTTT 274 Query 45245 ATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||| || || || |||| ||| | |||||| | ||| ||||| || || | Sbjct 275 ATCCTGTATCTTGGCCTTGACATTTTCAATGGTGTCACTGGGCTCCACTTCCAGGGTTAT 334 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || ||||| || || || ||||| || || ||||| Sbjct 335 GGTCTTGCCAGTCAGGGTCTTTACGAAGATCTGCAT 370 >seq2976538 Length=278 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 |||||||| | ||||| | || ||||| || ||||||||||| ||||| || || || Sbjct 257 ATTCCTCCTCTAAGCCTTAGTACAAGATGAAGGGTTGATTCCTTCTGGATGTTGTAGTC- 199 Query 45171 CTGACG--GTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 |||| || | ||| |||| || ||||| || | || || | |||||||| | Sbjct 198 -TGACAAAGTCCTGCCATCTTCCAGCTGCTTTCCAGCAAAAATTAAGCACTGCTGGTCTG 140 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288 | ||||||||||| || ||||||||||| ||| | ||||| ||| || | | Sbjct 139 GAGGAATGCCTTCCTTGTCTTGAATTTTGGCTTTCACATTTTCTATGGTATCACTGGGTT 80 Query 45289 CGACTTCGAGAGTAACCGTTTTGCC 45313 | ||||| ||||| | |||||||| Sbjct 79 CTACTTCCAGAGTTATGGTTTTGCC 55 >seq4952844 Length=1519 Score = 93.3 bits (102), Expect = 4e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 ||||| | ||||| | || ||||| || || ||||| || || ||||||||||| | Sbjct 222 CCTCCTCTCAGCCTGAGGACAAGATGAAGTGTGGATTCTTTCTGAATATTATAATCTGAG 163 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| | ||| ||||| || ||||| || | || | || || || || || ||| Sbjct 162 AGTGTTCTGCCATCTTCCAACTGCTTTCCAGCAAAAATGAGACGCTGTTGATCAGGTGGA 103 Query 45234 ATGCCTTCTTTATCTTGAATTTTT 45257 |||||||||||||||||||||||| Sbjct 102 ATGCCTTCTTTATCTTGAATTTTT 79 >seq70167 Length=66857 Score = 93.3 bits (102), Expect = 4e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 123588 ATTATCGAAACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAAC 123647 ||||| || | || | ||||| || || || ||||||||||| ||||| || || ||| Sbjct 50105 ATTATTGACTCTCAGATTGAAACTGGCACTCCTTACATGCTCTATAAAGATGCATGTAAC 50046 Query 123648 AGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATT 123707 | ||| | |||||| ||||| ||||| || || || |||||||| || | |||||| Sbjct 50045 CGTAAATCAAATCAGCAAAACTTAGGAACCATCAAGTGCAGTAATCTATGTACAGAAATT 49986 Query 123708 ATCGAATACAGCGATGCCGAT 123728 | ||||||||| ||| ||| Sbjct 49985 GTTGAATACAGCTCTGCAGAT 49965 >seq2316783 Length=240 Score = 91.5 bits (100), Expect = 1e-13 Identities = 110/148 (74%), Gaps = 4/148 (3%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | || ||| |||||||| |||||||||||||| || ||||||| Sbjct 163 ATCCCACCACGGAGACGCAGCACAAGATGCAGAGTTGATTCCTTTTGAATGTTATAAT-- 106 Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 ||||| | | || || || | || ||||| || | || | || |||||||| | Sbjct 105 CTGACAGCGTGCGACCGTCTTCAAGCTGCTTTCCAGCAAAAATAAGACGCTGCTGGTCAG 46 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTT 45256 | ||||| ||||| ||||||||||| || Sbjct 45 GAGGAATACCTTCCTTATCTTGAATCTT 18 >seq4730498 Length=794 Score = 87.8 bits (96), Expect = 2e-12 Identities = 115/157 (73%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244 ||| || ||||| ||||| | | ||||| || ||||| || || ||||||||||||| Sbjct 520 ATCTTCGAATTGCTTTCCAGAAAAAATCAAGCGCTGCTGATCAGGAAGAATGCCTTCTTT 579 Query 45245 ATCTTGAATTTTTTGTTTGATCGCTTCTA-CGGTGTCGGAAGACTCGACTTCGAGAGTAA 45303 || ||||||||| ||| | || ||| | || || |||| || || || || || | Sbjct 580 GTCCTGAATTTTTGCTTTCA-CGTTTCCATTTGTATCAGAAGGTTCAACCTCTAGGGTGA 638 Query 45304 CCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || || || ||||| |||||||| ||||| Sbjct 639 TGGTTTTCCCTGTGAGGGTTTTCACAAAAATCTGCAT 675 >seq2361161 Length=242 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/231 (68%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45101 GTTTTATTTTATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGAT 45160 ||||||| ||||||||||| || | | || | ||| || || || ||||| ||||| Sbjct 229 GTTTTATC--ATTCCTCCGCGAAGTCGAAGAACCAAATGTAGAGTAGACTCCTTCTGGAT 172 Query 45161 ATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTG 45220 | ||||| | ||| ||| |||| ||||| || || |||||| | || Sbjct 171 GCTGTAATCAGACAAGGTGCGTCCATCTTCCAGCTGTTTGCCAGCAAATATCAGCCTCTG 112 Query 45221 CTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTC 45280 |||||| || ||||||||||||||||| || ||||| ||| | ||||| ||||| Sbjct 111 CTGGTCTGGTGGAATGCCTTCTTTATCCTGGATTTTGGCTTTCACATTTTCTATCGTGTC 52 Query 45281 GGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAA 45331 | || || || || || | || ||||| ||||| ||||| || || Sbjct 51 ACTTGGTTCCACCTCAAGTGTGATGGTCTTGCCAGTTAGTGTTTTGACGAA 1 >seq1187548 Length=1734 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196 ||||| || || || ||||| ||||||||||| | ||| ||| ||||| || Sbjct 1719 ATGCAAAGTGGACTCTTTTTGAATATTATAATCAGACAAGGTGCGTCCATCTTCCAACTG 1660 Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256 |||||| || | |||| || || || || || ||||||||||||||||| ||||| || Sbjct 1659 TTTTCCAGCAAAGATCAGTCTCTGTTGATCTGGGGGAATGCCTTCTTTATCCTGAATCTT 1600 Query 45257 TTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 || | ||| | ||||| | || ||||| ||||| | ||||| || || Sbjct 1599 AGCCTTCACATTTTCAATTGTGTCACTTGGTTCCACTTCAAGAGTTATTGTTTTACCAGT 1540 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 || || || ||||| || ||||| Sbjct 1539 CAGTGTCTTCACAAAGATCTGCAT 1516 >seq990654 Length=1195 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 ||||| | || || | || ||||| || ||||| || || || ||||| || || | Sbjct 1186 CCTCCTCTCAGTCTGAGGACAAGATGGAGAGTTGACTCTTTCTGAATATTGTAGTCTGAG 1127 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| | ||| |||| || ||||| || | || | |||||||| || || ||| Sbjct 1126 AGTGTTCTGCCATCTTCCAGCTGCTTTCCAGCAAAAATAAGACGTTGCTGATCAGGTGGA 1067 Query 45234 ATGCCTTCTTTATCTTGAATTTTT 45257 |||||||||||||||||||||||| Sbjct 1066 ATGCCTTCTTTATCTTGAATTTTT 1043 >seq47141 Length=13405 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/211 (69%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGT 45189 || || |||| ||||| ||||| || || || || || || || | || ||| | Sbjct 4961 ACAAGGTGCAAAGTTGACTCCTTCTGAATGTTGTAGTCA--GAAAGTGTGCGACCATCTT 5018 Query 45190 CCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTT 45249 | | ||| ||||| || | ||||| || ||||| | || ||||||||||| || || Sbjct 5019 CAAGTTGCTTTCCAGCAAAAATCAAGCGCTGCTGATTAGGAGGAATGCCTTCCTTGCTTT 5078 Query 45250 GAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTT 45309 |||||||| ||| ||| | || ||||||| || || || || || | |||| Sbjct 5079 GAATTTTTACTTTCCCATTTTCAATTGTATCGGAAGGTTCAACCTCTAGGGTGATGGTTT 5138 Query 45310 TGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | || || || ||||| |||||||| ||||| Sbjct 5139 TCCCTGTGAGGGTTTTCACAAAAATCTGCAT 5169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424536216015900