Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1187548 93.3 4e-14 seq4730498 84.2 2e-11 seq3343411 82.4 8e-11 seq2535487 82.4 8e-11 >seq1187548 Length=1734 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| |||||| || ||| ||||| ||||| || || || | ||||| | || || Sbjct 593 ACCAAATGCAAAGTGGACTCTTTTTGAATATTATAATCAGACAAGGTGCGTCCATCTTCC 534 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 | ||| ||||| || || |||| | ||| ||||| | || | | || || ||| | Sbjct 533 AACTGTTTGCCAGCAAAAATCAGCCTCTGTTGGTCAGGTGGAATTCCTTCTTTATCCTGG 474 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 || || ||| | | | | ||||| || | |||||| || | |||||||| ||| Sbjct 473 ATTTTAGCCTTCACATTTTCTATTGTGTCACTTGGTTCCACCTCAAGTGTGATGGTCTTG 414 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || |||||||||||||||||||| Sbjct 413 CCAGTGAGTGTTTTAACAAAGATTTGCAT 385 >seq4730498 Length=794 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| || || | || || | ||| || |||||| || || |||||||| || Sbjct 449 CCACCTCTCAAGCGAAGGACAAGGTTCAAAGTTGACTCCTTCTGAATGTTGTAGTCAGAA 508 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || |||| ||||| || | || |||||||||||||| || | | Sbjct 509 AGTGTGCGACCATCTTCGAATTGCTTTCCAGAAAAAATCAAGCGCTGCTGATCAGGAAGA 568 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCA-CCGTGTCGCTCGATTCCAC 46545 | || || |||||| ||| || | ||| ||| ||| || || | ||| || Sbjct 569 ATGCCTTCTTTGTCC-TGAATTTTTGCTTTCACGTTTCCATTTGTATCAGAAGGTTCAAC 627 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | ||||||||||| || || || ||||| ||||| || ||||| Sbjct 628 CTCTAGGGTGATGGTTTTCCCTGTGAGGGTTTTCACAAAAATCTGCAT 675 >seq3343411 Length=310 Score = 82.4 bits (90), Expect = 8e-11 Identities = 150/220 (68%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || | ||| | ||| |||||||| | ||| ||||||||||| || ||||| | Sbjct 90 TGCCACCACGTAACCTCAAGACCAGATGAAGTGTTGATTCCTTTTGGATGTTATAGTCTG 149 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || ||||| | || || ||||| ||||| || ||||| | | |||||| || | | Sbjct 150 AGAGGGTGCGTCCATCCTCTAGCTGTTTGCCTGCAAATATAAGCCTCTGCTGATCTGGGG 209 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || || || || ||| || || | | | | |||||| || | ||||| Sbjct 210 GAATGCCTTCTTTATCTTGGATTTTAGCTTTTACATTTTCTATCGTGTCACTAGGTTCCA 269 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAA 46584 | || | || ||||| || || || || || || ||||| Sbjct 270 CTTCAAGGGTAATGGTCTTACCAGTTAGAGTCTTCACAAA 309 >seq2535487 Length=251 Score = 82.4 bits (90), Expect = 8e-11 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || | ||| | ||| |||||||||| || |||||||||||| || ||||| | Sbjct 131 TGCCACCACGTAACCTCAAGACCAGATGCAGCGTCGACTCCTTTTGGATGTTATAGTCTG 72 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 | |||||||| | || || ||||| ||||| || ||||| | | |||||| || Sbjct 71 AGAGAGTGCGGCCATCCTCTAGCTGTTTGCCTGCAAATATAAGCCTCTGCTGATC 17 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530005854069000