Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq1187548 109 4e-19 seq21712 86.0 4e-12 >seq1187548 Length=1734 Score = 109 bits (120), Expect = 4e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 39505 CGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCA 39564 || || ||||||||||||||| |||||||| ||||||||||| | ||| |||| || Sbjct 1730 CGAAGGACCAAATGCAAAGTGGACTCTTTTTGAATATTATAATCAGACAAGGTGCGTCCA 1671 Query 39565 TCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTG 39624 || ||||| ||||| || |||| || | | ||| ||||| | ||| | ||||||||| Sbjct 1670 TCTTCCAACTGTTTTCCAGCAAAGATCAGTCTCTGTTGATCTGGGGGAATGCCTTCTTTA 1611 Query 39625 TCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATT 39684 || || || || | | | | |||||| |||||| || | ||| ||| Sbjct 1610 TCCTGAATCTTAGCCTTCACATTTTCAATTGTGTCACTTGGTTCCACTTCAAGAGTTATT 1551 Query 39685 GTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 |||||||| || | || || || ||||||||||| Sbjct 1550 GTTTTACCAGTCAGTGTCTTCACAAAGATCTGCAT 1516 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 39505 CGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCA 39564 || || ||||||||||||||| |||||||| ||||||||||| | ||| |||| || Sbjct 599 CGAAGGACCAAATGCAAAGTGGACTCTTTTTGAATATTATAATCAGACAAGGTGCGTCCA 540 Query 39565 TCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTG 39624 || ||||| ||||| || ||||||| | | ||| || || | || | |||||||| Sbjct 539 TCTTCCAACTGTTTGCCAGCAAAAATCAGCCTCTGTTGGTCAGGTGGAATTCCTTCTTTA 480 Query 39625 TCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATT 39684 || ||||| || | | ||| |||||| |||||| || | || || Sbjct 479 TCCTGGATTTTAGCCTTCACATTTTCTATTGTGTCACTTGGTTCCACCTCAAGTGTGATG 420 Query 39685 GTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720 || || || || | ||||| || ||||| |||||| Sbjct 419 GTCTTGCCAGTGAGTGTTTTAACAAAGATTTGCATG 384 >seq21712 Length=99785 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551 ||| |||| || || || || | ||| | ||| ||||||| || ||||| ||||| | Sbjct 91298 GCCTCCTCTCAGTCGGAGGACAAGATGAAGAGTAGTTTCTTTCTGAATATTGTAATCAGA 91239 Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611 | | ||| ||||| || || || ||||| | | ||| |||||||| | || Sbjct 91238 GAGTGATCTGCCATTTTCCAACTGCTTTCCAGCAAAACTGAGACGTTGCTGATCAGGTGG 91179 Query 39612 TACGCCTTCTTTGTCGCATATTTTTTGTTTAA--TCGTCGCTACTGTGTCTGCGCTTTCC 39669 | ||||||||| || |||||| || | | || || ||| ||| | ||| Sbjct 91178 AATGCCTTCTTTTTCTTGAATTTTTGTCTTCACGTTTTCAATAGTGTCACTGGG--TTCA 91121 Query 39670 ACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || ||||||||||| |||||||| || ||||| |||||||||||||| Sbjct 91120 ACTTCCAAAGTAATGGTTTTACCTGTAGGGGTTTTGACGAAGATCTGCAT 91071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 326258600636975