Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq215054 123 2e-23 seq3343411 107 1e-18 seq1187548 93.3 3e-14 >seq215054 Length=1089 Score = 123 bits (136), Expect = 2e-23 Identities = 143/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||||||||| ||||||||||| | || |||| |||| ||| ||||| ||||| Sbjct 179 TTCCTTCTGAATGTTGTAGTCCGAAAGTGTACGGCCATCTTCCAACTGCTTTCCTGCAAA 238 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || |||||||||||| |||| | || || || || ||||| ||||| Sbjct 239 AATCAGACGTTGCTGGTCTGGCGGTATACCTTCTTTATCCTGTATCTTGGCCTTGACATT 298 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | | || | |||| || ||| || || | ||||||||| || || || || ||||| || Sbjct 299 TTCAATGGTGTCACTGGGCTCCACTTCCAGGGTTATGGTCTTGCCAGTCAGGGTCTTTAC 358 Query 34970 AAAGATCTGCATA 34982 |||||||||||| Sbjct 359 GAAGATCTGCATA 371 Score = 93.3 bits (102), Expect = 3e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 34764 AACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGT 34823 |||||||| |||| |||| ||| ||| || || ||||||||||| || ||| | ||| Sbjct 621 AACCTCAAGACCAGATGAAGTGTTGATTCCTTTTGGATGTTATAGTCTGAGAGGGTACGT 680 Query 34824 TCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCC 34883 |||| || |||||||| || |||||||| || | || || || | || | || || Sbjct 681 CCATCCTCTAGCTGTTTGCCCGCAAATATAAGCCTCTGTTGATCAGGGGGAATGCCTTCT 740 Query 34884 TTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTT 34943 || || || || ||| || | | || | |||| | || || || | ||| Sbjct 741 TTATCTTGGATTTTAGCTTTTACATTTTCAATTGTGTCACTAGGTTCCACTTCAAGGGTA 800 Query 34944 ATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || || || | ||||||||||||||||||||| Sbjct 801 ATAGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATA 839 >seq3343411 Length=310 Score = 107 bits (118), Expect = 1e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34764 AACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGT 34823 |||||||| |||| |||| ||| ||| || || ||||||||||| || ||| | ||| Sbjct 101 AACCTCAAGACCAGATGAAGTGTTGATTCCTTTTGGATGTTATAGTCTGAGAGGGTGCGT 160 Query 34824 TCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCC 34883 |||| || |||||||| || |||||||| || | ||||| ||| | || | || || Sbjct 161 CCATCCTCTAGCTGTTTGCCTGCAAATATAAGCCTCTGCTGATCTGGGGGAATGCCTTCT 220 Query 34884 TTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTT 34943 || || || || ||| || | |||||| |||| | || || || | ||| Sbjct 221 TTATCTTGGATTTTAGCTTTTACATTTTCTATCGTGTCACTAGGTTCCACTTCAAGGGTA 280 Query 34944 ATGGTTTTTCCCGTGAGAGTCTTCACAAA 34972 ||||| || || || |||||||||||||| Sbjct 281 ATGGTCTTACCAGTTAGAGTCTTCACAAA 309 >seq1187548 Length=1734 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 ||||| || | ||| ||||| ||||| ||||| || || | | | ||| |||| ||| Sbjct 1724 ACCAAATGCAAAGTGGACTCTTTTTGAATATTATAATCAGACAAGGTGCGTCCATCTTCC 1665 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 | ||||||||| ||||| || |||| || || ||| | || | || || || || | Sbjct 1664 AACTGTTTTCCAGCAAAGATCAGTCTCTGTTGATCTGGGGGAATGCCTTCTTTATCCTGA 1605 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || || | | || | |||| | || || || | ||||| ||||| Sbjct 1604 ATCTTAGCCTTCACATTTTCAATTGTGTCACTTGGTTCCACTTCAAGAGTTATTGTTTTA 1545 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || |||||||||||||||||||| Sbjct 1544 CCAGTCAGTGTCTTCACAAAGATCTGCAT 1516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 304904355636600