Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq326921 174 2e-38 seq438317 131 2e-25 seq28755 118 1e-21 seq70167 109 6e-19 seq247341 105 7e-18 seq314876 100 3e-16 seq1060095 98.7 1e-15 >seq326921 Length=5948 Score = 174 bits (192), Expect = 2e-38 Identities = 308/440 (70%), Gaps = 28/440 (6%) Strand=Plus/Minus Query 19084 CCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATC 19143 ||||| ||||| |||| | ||||| |||||| || | ||||| ||| ||||||| Sbjct 5252 CCTTCAACTGCA--AAAATCCACTAGGCTTTCTTCAAATGAAGCATTGGTATCATGAATC 5195 Query 19144 CATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAAT 19203 || | || ||| | || || |||||| | |||| || |||| | ||||||| Sbjct 5194 CAACGAAATGTCCATGCTGCTTTTCGTTTTACGTACGGCAACGTTTCTACGGCATTAAAT 5135 Query 19204 AGATACA----TACGCTCATCTGTATCTTTAACATATGCATCTATCAATAA-ACTGTACA 19258 | ||| |||| || ||||| || ||||| ||| || || || |||||||| Sbjct 5134 GAAAACAATTTTACGA----CTTTATCTCGAATATATGTATC-ATTAAGAAGACTGTACA 5080 Query 19259 TTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTA 19318 | ||||||||||||||||||||||| | | ||| || || |||||| | Sbjct 5079 TCTCTGAATGAATATTTTCTATAGCATTTTAAAA--CG------CACTGTGCTTCAAGAA 5028 Query 19319 TCTGTACTTCACTACAAAATCTTTCGACCAAATTTT-CATTAACTATTCCATCACTAGCT 19377 | ||||||| | |||| ||| || ||||||| || | |||||||||||||||||| Sbjct 5027 TTTGTACTTTGTGAATGAATCGTTCTACTAAATTTTTCACTCACTATTCCATCACTAGCT 4968 Query 19378 GCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTATTCCAA 19437 |||||||||| ||| | | |||||| |||| | ||||| ||| ||| | |||| Sbjct 4967 GCAAAAAATGTTAAAATGTATTTAATGAAATACTGTTCAT-TGACCGTAAGTTGTTCC-- 4911 Query 19438 TCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTT 19497 || | || ||| ||||| |||||||| || |||||||| |||| | ||||| Sbjct 4910 -CAATGAT---TTTTCCCAAATCAACTTCTTCTACAGTCCAAAAGAAAGCAACAGCTTTC 4855 Query 19498 TTATACATGTTCCATATATC 19517 ||||||||| |||||| ||| Sbjct 4854 TTATACATGGTCCATAAATC 4835 >seq438317 Length=14545 Score = 131 bits (144), Expect = 2e-25 Identities = 150/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 19345 ACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATA 19404 |||| |||||||||||| || ||||||||||| |||||||| |||| | ||| ||| Sbjct 3413 ACCAGATTTTCATTAACAATACCATCACTAGCAGCAAAAAAGGCTAGGATATGCGAAATG 3472 Query 19405 AAATGTTTTTCATCTGAGGTTAATGTATTCCAATCATTAATATCTTTAGATAAATCTACT 19464 ||||| |||| || ||||| | ||| ||| | |||||| || | ||| ||| Sbjct 3473 AAATGCCTTTCTGTAGATTTTAATTTCCCCCAGTCAGCTAAATCTTTTGAGAGATCCACT 3532 Query 19465 TCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTCCATATATCACGATAT 19524 |||||| | |||||||| || || ||||| || || ||||| | ||| |||||| |||| Sbjct 3533 TCTTCAGCAGTCCAAAATGATGCTTCTGCCTTCTTGTACATTTGCCAAATATCAGGATAC 3592 Query 19525 TGTATAGGAAATATAACAAATC 19546 | || || || || ||||||| Sbjct 3593 TCGATGGGGAAAATTACAAATC 3614 >seq28755 Length=37593 Score = 118 bits (130), Expect = 1e-21 Identities = 156/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 65857 ATAGGAATAGATGAAGGCCAATTCTTTCAAGATATTGTAGAGTTTTGTGAAAATATGGCA 65916 || || ||||| |||| || || |||| ||| |||||| |||| ||| | ||||| Sbjct 15851 ATCGGTATAGACGAAGCACAGTTTTTTCCAGACATTGTAACGTTTGCAGAAGAAATGGCC 15792 Query 65917 AATAAAGGAAAAATAGTGATAGTTGCAGCATTGGATGGAACATTTAAAAGAAAACCTTTT 65976 ||| ||||||||||| | || |||| | ||||||||||| |||| || |||| Sbjct 15791 AATCAAGGAAAAATAATTATCATTGCCTGTCTAAATGGAACATTTCGAAGAGAAGCTTTC 15732 Query 65977 GGTAATGTATTAAATTTAATTCCATTATCTGAAACAGTAACAAAACTTACA-GCTGTGTG 66035 || ||| | || ||| ||||||||||| | |||| || |||| ||| | ||||| || Sbjct 15731 GGAAATATCTTGAATCTAATTCCATTAGCCGAAAGCGTGGTAAAA-TTATATGCTGTCTG 15673 Query 66036 TATGAAATGTTTTAAAGATGCATCTTTTTCAAAA 66069 |||| |||||| |||| || || ||| ||||| Sbjct 15672 TATGTCGTGTTTTCAAGAGGCTTCGTTTACAAAA 15639 >seq70167 Length=66857 Score = 109 bits (120), Expect = 6e-19 Identities = 104/133 (78%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 47328 TGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGAT 47387 ||||| |||||||||| |||||| ||| |||| | ||| || || ||||| || ||||| Sbjct 30011 TGAAACTCTCCAGATAATACTCTTCGGATATAGAAATTGCTAGTGTATGGCTCAATAGAC 30070 Query 47388 TCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTA 47447 ||||||||||||| ||| || ||||| || ||||| ||||| | || | || || || Sbjct 30071 TCATTATTTCCAAGAATCTGTGCAGTCGAAGCTGTTGGCATTGGAGCTATTAGCAAACTG 30130 Query 47448 TTTCTTACTCCAT 47460 || ||||| |||| Sbjct 30131 TTCCTTACACCAT 30143 Score = 87.8 bits (96), Expect = 2e-12 Identities = 109/149 (73%), Gaps = 4/149 (3%) Strand=Plus/Plus Query 47906 TACCTCATTTGGATTAGTATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGT 47965 |||||||| || | | |||| | ||||| | ||||||||||| || ||||| || Sbjct 49959 TACCTCATCTGCAGAGCTGTATTCAACAATTTCTGTACATAGATTACTGCACTTGATGGT 50018 Query 47966 ACCCAAATTTTGATGATT--ATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGT 48023 || || ||||| ||||| ||| ||||||||| || || || ||||| |||| Sbjct 50019 TCCTAAGTTTTGCTGATTTGATTTACG--GTTACATGCATCTTTATAGAGCATGTAAGGA 50076 Query 48024 GTTCCAGTTTCTATCTGAGATTCAATGAT 48052 || |||||||| |||||||| ||||| || Sbjct 50077 GTGCCAGTTTCAATCTGAGAGTCAATAAT 50105 >seq247341 Length=25763 Score = 105 bits (116), Expect = 7e-18 Identities = 117/154 (76%), Gaps = 4/154 (3%) Strand=Plus/Minus Query 18613 TAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATTCATTACTCCCATTTTT 18672 ||||| ||| ||||||||| ||| | | ||||| || ||||||||| ||| Sbjct 16441 TAAAAGTCAGCATCCAAAGTAAAGCAGTGGTCTTCCTTCTTGGCCATTACTCCACACTTT 16382 Query 18673 TGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTC--TAATGATATACATT 18730 |||||||| |||||| | ||||| || || |||||||||||||| | |||| | | Sbjct 16381 TGATATTCTGCAACTTTCTTTTCGAAAAAGTTAGTTTTTCCCTCCAGACTGATGT--GAT 16324 Query 18731 CCATAAAATCAAATGGATTTTTTACATTATATAT 18764 ||||||||||||||||||||| |||||| || || Sbjct 16323 CCATAAAATCAAATGGATTTTCTACATTGTAAAT 16290 >seq314876 Length=46846 Score = 100 bits (110), Expect = 3e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 65857 ATAGGAATAGATGAAGGCCAATTCTTTCAAGATATTGTAGAGTTTTGTGAAAATATGGCA 65916 || || ||||| |||| || || |||| ||| || || |||| |||| | ||||| Sbjct 32830 ATCGGTATAGACGAAGCACAGTTTTTTCCAGACATCGTGACGTTTGCTGAAGAAATGGCC 32889 Query 65917 AATAAAGGAAAAATAGTGATAGTTGCAGCATTGGATGGAACATTTAAAAGAAAACCTTTT 65976 ||| ||||||||||| | || |||| || || ||||| ||| |||| || |||| Sbjct 32890 AATCAAGGAAAAATAATTATCATTGCCTGTTTAGACGGAACTTTTCGAAGAGAAGCTTTC 32949 Query 65977 GGTAATGTATTAAATTTAATTCCATTATCTGAAACAGTAACAAAACTTACA-GCTGTGTG 66035 || ||| | || |||||||||| ||| | |||| || |||| ||| | ||||| | Sbjct 32950 GGAAATATCTTGCATTTAATTCCGTTAGCCGAAAGCGTGGTAAAA-TTATATGCTGTCTA 33008 Query 66036 TATGAAATGTTTTAAAGATGCATCTTTTTCAAAA 66069 |||| ||||| |||| || || ||| ||||| Sbjct 33009 TATGTCGCGTTTTCAAGAAGCTTCATTTACAAAA 33042 >seq1060095 Length=681 Score = 98.7 bits (108), Expect = 1e-15 Identities = 148/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 47553 GGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCC 47612 || || || | |||||||| ||| | || ||| | || | |||||| |||||||| Sbjct 411 GGTGATCCTTCATATGTTTCATATGTTCCATATTTCTCGGCTAATTCACAGCTTGCTTCA 470 Query 47613 AATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTCCTTGCTTC-TGA-TG 47670 | | | |||||| || |||||||| |||| ||| || || ||| |||||| | | || Sbjct 471 AGGGAAGCATAATAAATAGTTTCAAAAATTTCTATATTAAGCTTCTGTGCTTCCTCACTG 530 Query 47671 ATTCAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAA 47730 ||||| ||||| || ||||||||||| |||||||| || || |||| Sbjct 531 --TCAAAGGGATACCTTAGCAAAATAAAGGTATCTGCCAAACCTTGAACTCCTATTCCAA 588 Query 47731 TTGGTCTATGAGTTTTATTAGAAAACTCAGC 47761 |||||| ||| ||||||| || |||||| Sbjct 589 TTGGTCGATGCCTTTTATTTGATTTCTCAGC 619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 527071328883000