Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq2861173 122 1e-22 seq780981 111 2e-19 seq28755 107 2e-18 seq17242 104 3e-17 seq314876 95.1 1e-14 seq438317 87.8 2e-12 seq326921 86.0 7e-12 >seq2861173 Length=269 Score = 122 bits (134), Expect = 1e-22 Identities = 151/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 78243 ATTGATGAAGGTCAATTTTTTAATGATATAGTGGAATTTTCTGAAAATATGGCAAATAAA 78302 || ||||||| || |||||| || || ||| ||| ||||| | ||||| ||| || Sbjct 268 ATAGATGAAGCACAGTTTTTTCCAGACATCGTGACGTTTGCTGAAGAAATGGCCAATCAA 209 Query 78303 GGAAAAATTGTTATTGTTTCGGCATTAGATGCTACATATCAAAGAAAAACATTTGGTAAT 78362 ||||||||| ||||| || | || | | || | || ||||||| | || || ||| Sbjct 208 GGAAAAATTATTATTATTGCCTGTCTAAACGGAACTTTTCGAAGAAAAGCTTTCGGAAAT 149 Query 78363 ATTCTAAATTTAATTCCATTATCTGAAAAGGTAATAAAATTAAATGCTATATGTAAAATA 78422 ||| || |||||||||| ||| | ||||| || |||||||| ||||| | |||| Sbjct 148 ATTTTACATTTAATTCCGTTAGCCGAAAACGTGGTAAAATTACATGCTGTTTGTATGTCG 89 Query 78423 TGTTTTAATGATGCTGCATTTACAAAA 78449 |||||| | || ||| ||||||||||| Sbjct 88 TGTTTTCAAGAAGCTTCATTTACAAAA 62 >seq780981 Length=1727 Score = 111 bits (122), Expect = 2e-19 Identities = 96/119 (81%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 37200 TCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttA 37259 ||||| ||||| || | ||||||| ||||| | |||||||| | |||||||| ||| Sbjct 146 TCATCCCTACTGATAAGTTCATTACTGAAGGTAAGACCTGGCATAAGTCCTCTTTTCTTA 87 Query 37260 ATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGC 37318 | ||||||||||| |||||| || ||||| |||||||| |||||||| || ||||| || Sbjct 86 AGCCAAAATATTGATGCAAAGGAACCAGAGAAGAAAATTCCTTCAACAGCAGCAAAAGC 28 >seq28755 Length=37593 Score = 107 bits (118), Expect = 2e-18 Identities = 286/430 (67%), Gaps = 14/430 (3%) Strand=Plus/Minus Query 78024 ATTTTGGGTCCTATGTTTTCTGGAAAAACAACAGAATTAGTTAGaatagttaaaagatat 78083 |||| ||| || | || || || ||||| || |||||| || | | | | ||| | ||| Sbjct 16058 ATTTGCGGTTCTTTCTTCTCCGGTAAAACCACCGAATTAATTCGGAGAATAAAACGTTAT 15999 Query 78084 aaaatagcaaattataaatgctgtgtaataaaatattataatgataataGATGT-GATGA 78142 |||| ||||| |||||| | | | || |||| |||||||||||||| | | | | Sbjct 15998 CAAATTGCAAAGATGAAATGCCTTATTAGAAGATATGCTAATGATAATAGATATAGCTCA 15939 Query 78143 AA-GTAT-AGTAAA-GACGCACGATGGAGTTTACATTGATTCTATTTCAACATTAAAACT 78199 || | || || | | |||| || | || || | | ||||| | |||| | Sbjct 15938 AATGCATTAGCACATGACGGACAAAC------ACTTTCAG-CAATTTCCGCTACAAAATT 15886 Query 78200 TAACGATATAATTTATGAAATGGATAATGTTGATGTTATTGGAATTGATGAAGGTCAATT 78259 | || |||| | | ||| || ||| || |||| || || || |||| || || Sbjct 15885 AATTTATTTAATGCACGTTATGAATTATG---ATATTATCGGTATAGACGAAGCACAGTT 15829 Query 78260 TTTTAATGATATAGTGGAATTTTCTGAAAATATGGCAAATAAAGGAAAAATTGTTATTGT 78319 |||| || || || ||| | ||| | ||||| ||| |||||||||| |||| | Sbjct 15828 TTTTCCAGACATTGTAACGTTTGCAGAAGAAATGGCCAATCAAGGAAAAATAATTATCAT 15769 Query 78320 TTCGGCATTAGATGCTACATATCAAAGAAAAACATTTGGTAATATTCTAAATTTAATTCC 78379 | | || ||| |||| || |||| || | || || ||||| | ||| ||||||| Sbjct 15768 TGCCTGTCTAAATGGAACATTTCGAAGAGAAGCTTTCGGAAATATCTTGAATCTAATTCC 15709 Query 78380 ATTATCTGAAAAGGTAATAAAATTAAATGCTATATGTAAAATATGTTTTAATGATGCTGC 78439 |||| | |||| || |||||||| ||||| | |||| |||||| | || ||| | Sbjct 15708 ATTAGCCGAAAGCGTGGTAAAATTATATGCTGTCTGTATGTCGTGTTTTCAAGAGGCTTC 15649 Query 78440 ATTTACAAAA 78449 ||||||||| Sbjct 15648 GTTTACAAAA 15639 >seq17242 Length=2525 Score = 104 bits (114), Expect = 3e-17 Identities = 93/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 37202 ATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAAT 37261 ||| ||||| || | ||||||| ||||| | |||||||| | |||||||| |||| Sbjct 2214 ATCCCTACTGATAAGTTCATTACTGAAGGTAAGACCTGGCATAAGTCCTCTTTTCTTAAG 2155 Query 37262 CCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGC 37318 ||||||||||| ||||| || ||||| |||||||| |||||||| || ||||| || Sbjct 2154 CCAAAATATTGACGCAAAGGAACCAGAGAAGAAAATTCCTTCAACAGCAGCAAAAGC 2098 >seq314876 Length=46846 Score = 95.1 bits (104), Expect = 1e-14 Identities = 153/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 78230 TGATGTTATTGGAATTGATGAAGGTCAATTTTTTAATGATATAGTGGAATTTTCTGAAAA 78289 |||| | || || || || |||| || |||||| || || ||| ||| ||||| | Sbjct 32823 TGATATCATCGGTATAGACGAAGCACAGTTTTTTCCAGACATCGTGACGTTTGCTGAAGA 32882 Query 78290 TATGGCAAATAAAGGAAAAATTGTTATTGTTTCGGCATTAGATGCTACATATCAAAGAAA 78349 ||||| ||| |||||||||| |||| || | ||||| | || | || |||| | Sbjct 32883 AATGGCCAATCAAGGAAAAATAATTATCATTGCCTGTTTAGACGGAACTTTTCGAAGAGA 32942 Query 78350 AACATTTGGTAATATTCTAAATTTAATTCCATTATCTGAAAAGGTAATAAAATTAAATGC 78409 | | || || ||||| | |||||||||| ||| | |||| || |||||||| |||| Sbjct 32943 AGCTTTCGGAAATATCTTGCATTTAATTCCGTTAGCCGAAAGCGTGGTAAAATTATATGC 33002 Query 78410 TATATGTAAAATATGTTTTAATGATGCTGCATTTACAAAA 78449 | | | || ||||| | || ||| ||||||||||| Sbjct 33003 TGTCTATATGTCGCGTTTTCAAGAAGCTTCATTTACAAAA 33042 >seq438317 Length=14545 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 37566 TTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGT 37625 ||||||||||| || ||||||||||| ||||| || || || | || || ||||| Sbjct 3419 TTTTCATTAACAATACCATCACTAGCAGCAAAAAAGGCTAGGATATGCGAAATGAAATGC 3478 Query 37626 CTTTCATCATTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCA 37685 ||||| | | |||||| ||| ||| | ||||||||| | ||| ||||| ||| Sbjct 3479 CTTTCTGTAGATTTTAATTTCCCCCAGTCAGCTAAATCTTTTGAGAGATCCACTTCTTCA 3538 Query 37686 ACGGTCCAAAAACTTGCCAATGCACGTTTATACATCGTCCAAATATCATTATGTTGTATT 37745 | |||||||| ||| ||| || ||||| |||||||||| || | || Sbjct 3539 GCAGTCCAAAATGATGCTTCTGCCTTCTTGTACATTTGCCAAATATCAGGATACTCGATG 3598 Query 37746 GGAAATATTACAAATC 37761 || || |||||||||| Sbjct 3599 GGGAAAATTACAAATC 3614 >seq326921 Length=5948 Score = 86.0 bits (94), Expect = 7e-12 Identities = 201/299 (67%), Gaps = 22/299 (7%) Strand=Plus/Minus Query 37438 TATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAG 37497 ||||| ||||| |||||| | || | ||| ||||| || || ||||||||||| |||| Sbjct 5115 TATCTCGAATATATGTATCATTAAGAAGACTGTACATCTCTGAATGAATATTTTCTATAG 5056 Query 37498 CTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAA-AAAACCTC 37556 | || | ||||| ||| |||||| | ||| || | || || || | | Sbjct 5055 C-ATTTTAAAAC-------GCACTGTGCTTCAAGAATTTGTACTTTGTGAATGAATCGTT 5004 Query 37557 TTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTT 37616 || || |||||| | ||||| ||||||||||||||||| || | | || ||||| Sbjct 5003 CTACTAAATTTTTCACTCACTATTCCATCACTAGCTGCAAAAAATGTTAAAATGTATTTA 4944 Query 37617 ATAAAATGTCTTTCATCATTTGA---TAATTTTTTCCAATCATTAATATCTTTTGATAAA 37673 || |||| |||| |||| ||| || |||| || | || |||| ||| Sbjct 4943 ATGAAATACTGTTCA----TTGACCGTAAGTTGTTCC---CAATGAT---TTTTCCCAAA 4894 Query 37674 TCAACTTCATCAACGGTCCAAAAACTTGCCAATGCACGTTTATACATCGTCCAAATATC 37732 |||||||| || || |||||||| || | || |||||||| ||||| | ||| Sbjct 4893 TCAACTTCTTCTACAGTCCAAAAGAAAGCAACAGCTTTCTTATACATGGTCCATAAATC 4835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555396398163000