Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq1187548 95.1 1e-14 seq215054 84.2 2e-11 >seq1187548 Length=1734 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||||| || ||||| || ||| | || |||||||| || || ||| |||||| Sbjct 1515 AATGCAGATCTTTGTGAAGACACTGACTGGTAAAACAATAACTCTTGAAGTGGAACCAAG 1574 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || | ||| || || || ||||| || | ||| |||||| Sbjct 1575 TGACACAATTGAAAATGTGAAGGCTAAGATTCAGGATAAAGAAGGCATTCCCCCAGATCA 1634 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||||||||| |||||||| || ||||| ||||||||| || || | |||||||| Sbjct 1635 ACAGAGACTGATCTTTGCTGGAAAACAGTTGGAAGATGGACGCACCTTGTCTGATTATAA 1694 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGT 28762 ||||||||||| || ||| |||| |||| Sbjct 1695 TATTCAAAAAGAGTCCACTTTGCATTTGGT 1724 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| |||||| | || || || ||||| || || |||||| Sbjct 385 ATGCAAATCTTTGTTAAAACACTCACTGGCAAGACCATCACACTTGAGGTGGAACCAAGT 444 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| |||||| || ||||| ||| | || || ||| Sbjct 445 GACACAATAGAAAATGTGAAGGCTAAAATCCAGGATAAAGAAGGAATTCCACCTGACCAA 504 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||| || || ||||| |||||||| ||||||||| || || | |||||||| Sbjct 505 CAGAGGCTGATTTTTGCTGGCAAACAGTTGGAAGATGGACGCACCTTGTCTGATTATAAT 564 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGT 28762 ||||||||||| || ||| |||| |||| Sbjct 565 ATTCAAAAAGAGTCCACTTTGCATTTGGT 593 >seq215054 Length=1089 Score = 84.2 bits (92), Expect = 2e-11 Identities = 153/224 (68%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| || || || || || || || |||||| ||| ||||||| Sbjct 838 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACTATTACCCTTGAAGTGGAACCTAGT 779 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | || |||||| || ||||| || | ||| |||||| Sbjct 778 GACACAATTGAAAATGTAAAAGCTAAAATCCAAGATAAAGAAGGCATTCCCCCTGATCAA 719 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||| ||||| |||||||||||||| | || ||| || | | || |||||| Sbjct 718 CAGAGGCTTATATTTGCGGGCAAACAGCTAGAGGATGGACGTACCCTCTCAGACTATAAC 659 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGG 28777 || ||||| ||||| || || || |||| || || ||||| || Sbjct 658 ATCCAAAAGGAATCAACACTTCATCTGGTCTTGAGGTTACGTGG 615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399551298536925