Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq614215 96.9 1e-14 >seq614215 Length=26252 Score = 96.9 bits (106), Expect = 1e-14 Identities = 228/341 (67%), Gaps = 10/341 (3%) Strand=Plus/Minus Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAAT--T 289086 ||| |||| ||||||||| ||||||||||| || ||||| | || | | ||| | Sbjct 16308 ACCCACAGAATCAATTTCATCAATGAAAATGACGCACGGTGCTCTTGATTTTGCACGGCT 16249 Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146 | ||| | ||||| || | || || | || || ||||| ||||||| | Sbjct 16248 GAAAAGA--TCTCTAACTCTTCTAGCACCTTGCCCTACTAGTATTTCATCAAATTCTGGT 16191 Query 289147 GCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTC 289206 | | | | || | || | |||||||||||||| || || |||| || | |||||| Sbjct 16190 CCTGCTGCATGGAAAAAAGGAACATTTGCTTCGCCAGCAACAGCCCGAGCTAACAGTGTC 16131 Query 289207 TTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCC---AGCA 289263 || || ||||| ||||| || ||| ||||| || ||||| | ||| | || |||| Sbjct 16130 TTTCCAGTTCCTGGTGGGCCAACTAGAAGAACACCTTTTGGCAATTTACCTCCAAGAGCA 16071 Query 289264 GACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCC 289323 || || | || ||| | || ||| || || ||||| | |||||| | ||| || Sbjct 16070 GA---GAATCTATCTGGGTTGCGTAGAAACTCAACTATTTCTTGAAGTTCTTGTTTGGCT 16014 Query 289324 TCATCACATCCTGCTACATCAGCAAAAGTAATATTAATATC 289364 ||||| |||| |||||| |||| || | || ||| || Sbjct 16013 TCATCTACTCCTTTTACATCTTCAAATGTTACATCAATTTC 15973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1377782449125775