Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq4335527 150 2e-30 seq110708 91.5 2e-12 >seq4335527 Length=518 Score = 150 bits (166), Expect = 2e-30 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | ||| ||||| ||||||||||||||||| | || Sbjct 66 GCTTGGCCAGCTCGCCGGGCAGCAACAGCCGCACAGCGGTCTGGATCTCGCGGGACGTGA 125 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 |||| |||||||| |||||||||| || ||||||| | ||||| |||| | Sbjct 126 TCGTCGACCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGGCAGCAATGCGCTCGAAAA 185 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| ||||| |||||||| ||||| ||| ||||||||| ||| |||| Sbjct 186 TGTCGTTCACAAAGCTGTTCATGATGCTCATCGCCTTCGACGAGATGCCCGTGTCAGGGT 245 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||||| ||||||||||| ||| Sbjct 246 GCACCTGCTTCAGCACCTTGTAAATG 271 >seq110708 Length=118502 Score = 91.5 bits (100), Expect = 2e-12 Identities = 101/132 (77%), Gaps = 2/132 (2%) Strand=Plus/Minus Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAA-GCCTCTGCTCGATCT 1592223 || || ||||| ||||| || || ||||||||| | || ||||| | || |||| || | Sbjct 115270 ACTCTGTTTGAATTGATACTGGCTGCCAACTACTTGGATATCAAAGGCT-TGCTTGACGT 115212 Query 1592224 TGGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGAC 1592283 | || || ||||||| ||||||||||| || || | |||||||| ||||| ||||| Sbjct 115211 TACTTGTAAAACTGTGGCTAACATGATCAAAGGTAAAACTCCCGAGGAAATCCGAAAGAC 115152 Query 1592284 CTTTAACATCAA 1592295 || |||||||| Sbjct 115151 ATTCAACATCAA 115140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5697917503369275