Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq3343411 98.7 7e-16 seq215054 98.7 7e-16 seq2535487 84.2 2e-11 >seq3343411 Length=310 Score = 98.7 bits (108), Expect = 7e-16 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 107564 TTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGCGATACTGT 107623 |||||| || ||| |||| || || ||||||||| | ||| ||| || | || || | Sbjct 310 TTTTGTGAAGACTCTAACTGGTAAGACCATTACCCTTGAAGTGGAACCTAGTGACACGAT 251 Query 107624 CGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACT 107683 | | |||||| || || |||||||||||| | ||| ||||||||||| || Sbjct 250 AGAAAATGTAAAAGCTAAAATCCAAGATAAAGAAGGCATTCCCCCAGATCAGCAGAGGCT 191 Query 107684 TATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAACATTCAAAA 107743 ||| | ||| || |||||||| ||||| | || | | ||||| ||||| ||||| Sbjct 190 TATATTTGCAGGCAAACAGCTAGAGGATGGACGCACCCTCTCAGACTATAACATCCAAAA 131 Query 107744 GGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||| || || | || |||| ||||| || || || || Sbjct 130 GGAATCAACACTTCATCTGGTCTTGAGGTTACGTGGTGG 92 >seq215054 Length=1089 Score = 98.7 bits (108), Expect = 7e-16 Identities = 156/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || ||||| || || || || ||||| || |||||| | ||| ||| || | Sbjct 838 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACTATTACCCTTGAAGTGGAACCTAGT 779 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | |||||| || || |||||||||||| | ||| ||||| Sbjct 778 GACACAATTGAAAATGTAAAAGCTAAAATCCAAGATAAAGAAGGCATTCCCCCTGATCAA 719 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| ||||| | |||||| |||||||| ||||| | || | | ||||| ||| Sbjct 718 CAGAGGCTTATATTTGCGGGCAAACAGCTAGAGGATGGACGTACCCTCTCAGACTATAAC 659 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGG 107779 || |||||||| || || | || |||| ||||| || || || Sbjct 658 ATCCAAAAGGAATCAACACTTCATCTGGTCTTGAGGTTACGTGG 615 >seq2535487 Length=251 Score = 84.2 bits (92), Expect = 2e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 107654 AGAAGGCGTGCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGC 107713 ||||||| | || ||||||||||| ||||| | ||| || |||||||| ||||| | Sbjct 1 AGAAGGCATTCCTCCAGATCAGCAGAGGCTTATATTTGCAGGCAAACAGCTAGAGGATGG 60 Query 107714 CAAAACAATGGCGGACTACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATT 107773 | || | | ||||| ||||| ||||||||||| ||| |||| |||| ||||| || Sbjct 61 CCGCACTCTCTCAGACTATAACATCCAAAAGGAGTCGACGCTGCATCTGGTCTTGAGGTT 120 Query 107774 GCGAGGGGG 107782 || || || Sbjct 121 ACGTGGTGG 129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 374635508100175