Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq1187548 145 6e-30 seq2361161 129 4e-25 seq215054 113 3e-20 seq1581887 107 1e-18 seq329421 105 5e-18 seq4202 104 2e-17 seq990654 95.1 9e-15 seq4952844 91.5 1e-13 seq2316783 87.8 1e-12 seq2535487 84.2 2e-11 >seq1187548 Length=1734 Score = 145 bits (160), Expect = 6e-30 Identities = 164/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || |||||||| | ||||| ||||||||||| |||||||| | | |||||| | Sbjct 1730 CGAAGGACCAAATGCAAAGTGGACTCTTTTTGAATATTATAATCAGACAAGGTGCGTCCA 1671 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || | ||||| |||||| | |||| ||| || ||||| || ||||| || ||||| Sbjct 1670 TCTTCCAACTGTTTTCCAGCAAAGATCAGTCTCTGTTGATCTGGGGGAATGCCTTCTTTA 1611 Query 29692 TCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 || || ||| || | || ||| |||| | |||||| |||| |||||||||||||| Sbjct 1610 TCCTG-AATCTTAGCCTTCACATTTTCAATTGTGTCACTTGGTTCCACTTCAAGAGTTAT 1552 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||||| ||||| | || || ||||| ||||||||| Sbjct 1551 TGTTTTACCAGTCAGTGTCTTCACAAAGATCTGCATT 1515 Score = 136 bits (150), Expect = 3e-27 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || |||||||| | ||||| ||||||||||| |||||||| | | |||||| | Sbjct 599 CGAAGGACCAAATGCAAAGTGGACTCTTTTTGAATATTATAATCAGACAAGGTGCGTCCA 540 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || | |||||||||||| | |||| || || || || || ||||| || ||||| Sbjct 539 TCTTCCAACTGTTTGCCAGCAAAAATCAGCCTCTGTTGGTCAGGTGGAATTCCTTCTTTA 480 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | ||| || ||| |||||| |||||| |||| || ||||| || || Sbjct 479 TCCTGGATTTTAGCCTTCACATTTTCTATTGTGTCACTTGGTTCCACCTCAAGTGTGATG 420 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||| | ||||||||||| || ||||| Sbjct 419 GTCTTGCCAGTGAGTGTTTTAACAAAGATTTGCAT 385 >seq2361161 Length=242 Score = 129 bits (142), Expect = 4e-25 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 29548 TTTTATCGTTGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATG 29607 ||||||| || ||||| | | || || |||||||| || || || || || || ||| Sbjct 228 TTTTATCATT--CCTCCGCGAAGTCGAAGAACCAAATGTAGAGTAGACTCCTTCTGGATG 171 Query 29608 TTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGC 29667 | ||||| | | |||||| ||| || || |||||||||||| |||||| || ||| Sbjct 170 CTGTAATCAGACAAGGTGCGTCCATCTTCCAGCTGTTTGCCAGCAAATATCAGCCTCTGC 111 Query 29668 TGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCA 29727 || || || ||||| || ||||| || || | ||| ||| ||| |||||| |||||| Sbjct 110 TGGTCTGGTGGAATGCCTTCTTTATCCTGGATTTTGGCTTTCACATTTTCTATCGTGTCA 51 Query 29728 GAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAA 29777 |||| || ||||| || || || |||||||||| ||||| || || Sbjct 50 CTTGGTTCCACCTCAAGTGTGATGGTCTTGCCAGTTAGTGTTTTGACGAA 1 >seq215054 Length=1089 Score = 113 bits (124), Expect = 3e-20 Identities = 168/242 (69%), Gaps = 15/242 (6%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || |||||| || | ||| || || ||||| |||||||||||||| || | Sbjct 840 CCACCACGCAGACGCAGTACTAGATGCAGAGTAGATTCCTTTTGAATGTTATAGTCTGAC 899 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || || || || || ||| | |||| | |||||| || || ||| Sbjct 900 AGTGTGCGACCATCTTCAAGCTGCTTTCCTGCAAAAATCAGACGTTGCTGGTCAGGAGGA 959 Query 29680 ATACCCTCTTTGTCT---------------TGTAATTTTTGTTTGACAGTTTCTACAGTG 29724 ||||| || || ||| || | || ||||||| |||| | |||| Sbjct 960 ATACCTTCCTTATCTNNNNNNNNNNNNNNNTGGATCTTAGCTTTGACATTTTCGATAGTG 1019 Query 29725 TCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGC 29784 ||| | |||||||||||||| || ||||| || || || || || ||||| |||||| Sbjct 1020 TCACTTGGCTCTACTTCAAGAGTGATTGTTTTACCTGTCAAAGTCTTCACAAAGATCTGC 1079 Query 29785 AT 29786 || Sbjct 1080 AT 1081 >seq1581887 Length=215 Score = 107 bits (118), Expect = 1e-18 Identities = 112/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 29641 TGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAAT 29700 |||||||||||| | ||||| || |||||||| || || || || ||||| ||||| | | Sbjct 1 TGTTTGCCAGCAAAAATCAACCTCTGCTGATCTGGTGGGATGCCTTCTTTATCTTGGATT 60 Query 29701 TTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCA 29760 ||| ||| ||| |||| | |||||| |||| ||||| || || || ||||| ||| Sbjct 61 TTTGCTTTCACATTTTCAATCGTGTCACTTGGTTCCACTTCCAGTGTAATTGTTTTACCA 120 Query 29761 GTTAAGGTTTTAACAAATATCTGCATT 29787 || | ||||| || || ||||||||| Sbjct 121 GTGAGTGTTTTCACGAAGATCTGCATT 147 >seq329421 Length=21321 Score = 105 bits (116), Expect = 5e-18 Identities = 132/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || |||||| || ||||| || || ||||| ||||||||||||||||| | Sbjct 18611 CCACCACGCAGACGCAGTACTAAATGCAGAGTAGATTCCTTTTGAATGTTATAATCTGAC 18670 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || || || || |||||| | |||| | |||||||| || ||| Sbjct 18671 AGAGTGCGACCATCTTCAAGCTGCTTTCCAGCAAAAATCAGACGCTGCTGATCAGGAGGA 18730 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||| || || ||||| | || |||||| |||| | |||||| | | || ||| Sbjct 18731 ATACCTTCCTTATCTTGGATCTTAGCCTTGACATTTTCAATGGTGTCACTAGGCTCCACT 18790 Query 29740 T 29740 | Sbjct 18791 T 18791 Score = 87.8 bits (96), Expect = 1e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| | | || || |||||||| || || ||||| || || ||||||||||| | Sbjct 19383 TCCTCCGCGAAGTCGAAGAACCAAATGTAGAGTAGATTCCTTCTGGATGTTATAATCAGA 19442 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | |||||| ||| || || |||||||||||| | ||||| || |||||||| || || Sbjct 19443 CAAGGTGCGTCCATCTTCCAGCTGTTTGCCAGCAAAAATCAACCTCTGCTGATCTGGTGG 19502 Query 29679 AAT 29681 || Sbjct 19503 GAT 19505 >seq4202 Length=39063 Score = 104 bits (114), Expect = 2e-17 Identities = 111/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || |||||||||||| |||||| || ||||| || || ||||| || ||||| Sbjct 37562 ATCTTCCAGCTGTTTGCCAGCAAATATCAGCCTCTGCTGGTCTGGTGGAATGCCTTCTTT 37621 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 || |||| ||| ||| ||| |||||| |||||| |||| || ||||| || || Sbjct 37622 ATCCTGTATTTTGGCTTTCACATTTTCTATCGTGTCACTTGGTTCCACCTCAAGTGTGAT 37681 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAA 29777 || |||||||||| ||||| || || Sbjct 37682 GGTCTTGCCAGTTAGTGTTTTGACGAA 37708 >seq990654 Length=1195 Score = 95.1 bits (104), Expect = 9e-15 Identities = 147/206 (71%), Gaps = 3/206 (1%) Strand=Plus/Minus Query 29555 GTTGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAAT 29614 |||| ||||| |||| | || || | ||| || || || ||||| ||||| || || | Sbjct 1190 GTTG-CCTCCTCTCAGTCTGAGGACAAGATGGAGAGTTGACTCTTTCTGAATATTGTAGT 1132 Query 29615 CCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCG 29674 | | | || | ||| || || || || |||||| | || | | ||||||||| | Sbjct 1131 CTGAGAGTGTTCTGCCATCTTCCAGCTGCTTTCCAGCAAAAATAAGACGTTGCTGATCAG 1072 Query 29675 GCGGAATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGT 29733 | ||||| || ||||| ||||| |||||||| || ||| | || | ||||||| || Sbjct 1071 GTGGAATGCCTTCTTTATCTTG-AATTTTTGCCTTCACATTCTCAATAGTGTCACTGGGT 1013 Query 29734 TCTACTTCAAGAGTTATAGTTTTGCC 29759 || ||||||||||| || ||||| || Sbjct 1012 TCCACTTCAAGAGTAATGGTTTTACC 987 >seq4952844 Length=1519 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/206 (71%), Gaps = 3/206 (1%) Strand=Plus/Minus Query 29555 GTTGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAAT 29614 |||| ||||| |||| | || || | |||||| ||||||||||| ||||| ||||||| Sbjct 226 GTTG-CCTCCTCTCAGCCTGAGGACAAGATGAAGTGTGGATTCTTTCTGAATATTATAAT 168 Query 29615 CCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCG 29674 | | | || | ||| || | || || |||||| | || | | || ||||| | Sbjct 167 CTGAGAGTGTTCTGCCATCTTCCAACTGCTTTCCAGCAAAAATGAGACGCTGTTGATCAG 108 Query 29675 GCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGT 29733 | ||||| || ||||| ||||| |||||||| || ||| | || | |||||| || Sbjct 107 GTGGAATGCCTTCTTTATCTTG-AATTTTTGCCTTCACATTCTCGATGGTGTCACTGGGT 49 Query 29734 TCTACTTCAAGAGTTATAGTTTTGCC 29759 || ||||| | ||| || ||||| || Sbjct 48 TCAACTTCCAAAGTAATGGTTTTACC 23 >seq2316783 Length=240 Score = 87.8 bits (96), Expect = 1e-12 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||||||| | ||| || || ||||| ||||||||||||||||| | | |||||| Sbjct 149 ACGCAGCACAAGATGCAGAGTTGATTCCTTTTGAATGTTATAATCTGACAGCGTGCGACC 90 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || || || || |||||| | || | | ||||| || || |||||||| || || Sbjct 89 GTCTTCAAGCTGCTTTCCAGCAAAAATAAGACGCTGCTGGTCAGGAGGAATACCTTCCTT 30 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTA 29719 ||||| ||| || | ||| ||| | |||| Sbjct 29 ATCTTG-AATCTTAGCTTTCACATTCTCTA 1 >seq2535487 Length=251 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 29666 GCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGT 29725 ||||||| || ||||| || || || || || | || ||| ||| | |||| |||| Sbjct 251 GCTGATCTGGAGGAATTCCTTCCTTATCCTGGATCTTGGCTTTTACATTCTCTATTGTGT 192 Query 29726 CAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCA 29785 || |||||||||| | |||||| ||||||||||| || || || ||||| ||||||| Sbjct 191 CACTGGGTTCTACTTCTAAAGTTATGGTTTTGCCAGTCAAAGTCTTTACAAAAATCTGCA 132 Query 29786 T 29786 | Sbjct 131 T 131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361807933482075