Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq39601 82.4 9e-11 >seq39601 Length=49171 Score = 82.4 bits (90), Expect = 9e-11 Identities = 129/181 (71%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 172886 ATTAAGGTTGCTCAGTTGAGTGGTTACATTGCAGAACAAACTGATTATAAACATGGTGAA 172945 || || ||||| |||||| ||||| |||||||| | ||| ||| | |||||||| Sbjct 20100 ATCAAAGTTGCACAGTTGGCTGGTTCAGTTGCAGAAAATTCTGCATATCATCATGGTGAG 20159 Query 172946 CAAAACCTTTGTGAAACTATAATAAAATTTGCACAGGATTTTGTAGGTACAAATAACAT- 173004 || | | |||||| || || || |||||| | ||||| || | || ||| | Sbjct 20160 CAGTCATTAACCGCAACTATCATTAATTTGGCACAGAACTTTGTTGGAAGCAACAACTTG 20219 Query 173005 AACATTACTTGAACCAGAT-GGTCAGTTTGGTACTAGACTTGAAGGAGGTAAAGATTCAG 173063 || ||| |||| | || || ||||||||||| |||||| |||| ||||||||| ||| Sbjct 20220 AATATT--TTGATGCCTATTGGACAGTTTGGTACAAGACTTCAAGGGGGTAAAGATGCAG 20277 Query 173064 C 173064 | Sbjct 20278 C 20278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 614434964175000