Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq16857 140 5e-28 >seq16857 Length=150560 Score = 140 bits (154), Expect = 5e-28 Identities = 236/339 (70%), Gaps = 2/339 (1%) Strand=Plus/Plus Query 142968 GATAAAGATGAGTGGACTACTTGGaaaaaaaTACCCGATCCCGTCTTGCATATAGAACTT 143027 ||| | ||||| ||| || | |||||| |||| | ||||| ||||||||||| ||||| Sbjct 113818 GATGAGGATGAATGGTCTGCATGGAAAGAAATGTCTGATCCAGTCTTGCATATTGAACTC 113877 Query 143028 AGGAGATGGGCGGATGTTTTTCTTATAGCGCCCTTAACGGCAAATACGTTAGCAAAAATA 143087 ||||||||||| || | | || ||||| || | || || ||||| || || | Sbjct 113878 AGGAGATGGGCAGACCTGCTGCTGATAGCACCAATGGATGCTAACACGTTGGCTAAGGTG 113937 Query 143088 GCCAACGGTATATGCGATAATTTACTAACATCTATAGTAAGAGCCTGGGATATAAATAAA 143147 || || || | || |||||||| | || | || ||| | || ||||||| | ||||| Sbjct 113938 GCTAATGGACTGTGTGATAATTTGTTGACTTGTACAGTCCGTGCATGGGATAGACATAAA 113997 Query 143148 CCTCTTATTTTTTGTCCCGCTATGAATAGCCTTATGTGGGAACATCCTATTACAGAAAAA 143207 || || || |||||||| || ||||| | ||||||||| |||||||| || | Sbjct 113998 CCACTAATGTTTTGTCCTGCGATGAACACATATATGTGGGATCATCCTATAACTTCCACT 114057 Query 143208 CATATAGATGCT-TTAAAACATATGGGTTTCATAGAAATAGAATGCATAGaaaaaaaaCT 143266 ||| | | ||| ||||| || | || | || ||||| || | | |||| ||| Sbjct 114058 CATGT-CAAGCTGTTAAAGGATCTTGGATATATTGAAATTCCTTGTGTTGCAAAACGACT 114116 Query 143267 AGCCTGCGGAGACATAGGAAATGGTGCTATGGCAGAAGT 143305 || || || || ||||| |||||| ||||| ||||| Sbjct 114117 TGCTTGTGGTGAAATAGGTTATGGTGGGATGGCTGAAGT 114155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 847099603692000