Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_024451.1 Length=220222 Score E Sequences producing significant alignments: (Bits) Value seq4916 105 9e-18 >seq4916 Length=195441 Score = 105 bits (116), Expect = 9e-18 Identities = 100/127 (79%), Gaps = 2/127 (2%) Strand=Plus/Plus Query 116915 TTGGTGGCATTAAAATATCCCGTCTCCTTATCGACAACCAACTTAAAGTCTCCAAATATC 116974 || || ||||||||||||||||| | ||||| | |||| |||||| |||||||| | Sbjct 157943 TTAGTAGCATTAAAATATCCCGTATTTTTATCTATTACCAGCTTAAAATCTCCAAAGAGT 158002 Query 116975 CCATGGTGGAAATTATCCTTGATTTGTTCATAACATATATCATTCAACGATGCCATTGTT 117034 |||| | ||||||| ||||||||||||||||||||||| || || || | ||| || Sbjct 158003 CCATACCAGTAATTATCTTTGATTTGTTCATAACATATATCTTTTAATGAAGACAT--TT 158060 Query 117035 TTTATAT 117041 |||||| Sbjct 158061 ATTATAT 158067 Score = 86.0 bits (94), Expect = 8e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 61095 TTGGTTGCATTAAAACAACCTGTGTTCTTATCAACAACCAACTTAAAGTCTCCAAATAGC 61154 || || ||||||||| | || || || ||||| | |||| |||||| |||||||| || Sbjct 157943 TTAGTAGCATTAAAATATCCCGTATTTTTATCTATTACCAGCTTAAAATCTCCAAAGAGT 158002 Query 61155 CCATAGTAAAAGTTGTCTTTAATATGTTCATAACATATATCATTCAA 61201 ||||| | | || ||||| || ||||||||||||||||| || || Sbjct 158003 CCATACCAGTAATTATCTTTGATTTGTTCATAACATATATCTTTTAA 158049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 660664237734000