Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq47141 91.5 1e-13 seq1187548 86.0 6e-12 seq2837514 82.4 7e-11 >seq47141 Length=13405 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/201 (72%), Gaps = 4/201 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| || | ||| ||| | || || || ||||| || Sbjct 4973 GTTGACTCCTTCTGAATGTTGTAGTCAGAAAGTGTGCGACCA-TCTTCAAGTTGCTTTCC 5031 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || |||| | |||||||| | ||||| |||||||||||| | ||| |||| ||| Sbjct 5032 AGCAAAAATCAAGCGCTGCTGATTAGGAGGAATGCCTTCCTTG-CTTTGAATTTTTACTT 5090 Query 133583 GAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | |||| || |||| || || || || | ||||| |||||| || || || | Sbjct 5091 TCCCATTTTCAATTGTATCGGAAGGTTCAACCTCTAGGGTGATGGTTTTCCCTGTGAGGG 5150 Query 133642 TTTTTACGAAAATCTGCATGG 133662 |||| || ||||||||||||| Sbjct 5151 TTTTCACAAAAATCTGCATGG 5171 >seq1187548 Length=1734 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/209 (70%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | ||||||||||| || ||||| ||||| || ||| | | | || || | Sbjct 590 AAATGCAAAGTGGACTCTTTTTGAATATTATAATCAGACAAGGTGCGTCCA-TCTTCCAA 532 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| ||||| || |||| |||| ||| ||||| || || || ||||| || || ||| Sbjct 531 CTGTTTGCCAGCAAAAATCAGCCTCTGTTGGTCAGGTGGAATTCCTTCTTTATCCTGGAT 472 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 || ||| | | || | ||||| | || ||||| || | |||| ||| ||||| Sbjct 471 TTTAGCCTTCACATTTTCTATTGTGTCACTTGGTTCCACCTCAAGTGTGATGGTCTTGCC 412 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATGG 133662 || || ||||| || || || ||||||| Sbjct 411 AGTGAGTGTTTTAACAAAGATTTGCATGG 383 >seq2837514 Length=268 Score = 82.4 bits (90), Expect = 7e-11 Identities = 98/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587 |||| || || ||||| || ||||||||||||||||| || |||||| ||||| | Sbjct 70 AAATCAGACGTTGCTGATCAGGAGGGATGCCTTCCTTATCTTGGATCTTAGCCTTGACAT 129 Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647 |||| ||||| | | |||||| || | ||| | || ||||| ||||| || |||| Sbjct 130 TTTCAATGGTGTCACTAGTCTCCACTTCCAGGGTTATTGTCTTGCCAGTCAGGGTCTTTA 189 Query 133648 CGAAAATCTGCAT 133660 | || || ||||| Sbjct 190 CAAATATTTGCAT 202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 453288124053000