Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq1187548 129 4e-25 seq2361161 107 1e-18 seq4730498 105 4e-18 seq21712 104 1e-17 seq47141 102 5e-17 seq215054 98.7 6e-16 seq1581887 91.5 9e-14 seq420093 87.8 1e-12 seq329421 86.0 4e-12 >seq1187548 Length=1734 Score = 129 bits (142), Expect = 4e-25 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||||||| | |||| ||||||||| || || ||||| || | |||||| | || ||| Sbjct 1724 ACCAAATGCAAAGTGGACTCTTTTTGAATATTATAATCAGACAAGGTGCGTCCATCTTCC 1665 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 || |||||||| ||||| |||| | ||| |||||| | || | |||||||| || | Sbjct 1664 AACTGTTTTCCAGCAAAGATCAGTCTCTGTTGATCTGGGGGAATGCCTTCTTTATCCTGA 1605 Query 33661 ATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || || |||| ||| ||| ||||| |||| |||||| |||| || || ||||| Sbjct 1604 ATCTTAGCCTTCA-CATTTTCAATTGTGTCACTTGGTTCCACTTCAAGAGTTATTGTTTT 1546 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||| || | || || |||||||||||||| Sbjct 1545 ACCAGTCAGTGTCTTCACAAAGATCTGCAT 1516 >seq2361161 Length=242 Score = 107 bits (118), Expect = 1e-18 Identities = 146/201 (73%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||||||||||||| ||| || || ||| ||||||| || | |||||| | || ||| Sbjct 200 ACCAAATGTAGAGTAGACTCCTTCTGGATGCTGTAATCAGACAAGGTGCGTCCATCTTCC 141 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | ||||| || ||||| |||| | |||||| ||| | || | |||||||| || Sbjct 140 AGCTGTTTGCCAGCAAATATCAGCCTCTGCTGGTCTGGTGGAATGCCTTCTTTATCCTGG 81 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 ||||| |||| |||| || | ||||| |||| |||||| |||| ||||| || || Sbjct 80 ATTTTGGCTTTC-ACATTTTCTATCGTGTCACTTGGTTCCACCTCAAGTGTGATGGTCTT 22 Query 33720 ACCTGTTAACGTTTTTACAAA 33740 || |||| ||||| || || Sbjct 21 GCCAGTTAGTGTTTTGACGAA 1 >seq4730498 Length=794 Score = 105 bits (116), Expect = 4e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||||||||| || | || | | | ||| ||| || || |||||||| || | Sbjct 447 CACCACCTCTCAAGCGAAGGACAAGGTTCAAAGTTGACTCCTTCTGAATGTTGTAGTCAG 506 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | |||||||| | || || ||||| ||||| | ||||||||| ||||||||||| | Sbjct 507 AAAGTGTGCGACCATCTTCGAATTGCTTTCCAGAAAAAATCAAGCGCTGCTGATCAGGAA 566 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCA-CGGTGTCGCTTGATTCC 33699 | | ||||||||||| |||||| || || || | || || || | ||| Sbjct 567 GAATGCCTTCTTTGTCCTGAATTTT-TGCTTTCACGTTTCCATTTGTATCAGAAGGTTCA 625 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | ||||| ||||| ||||| | ||||| ||||| |||||||| Sbjct 626 ACCTCTAGGGTGATGGTTTTCCCTGTGAGGGTTTTCACAAAAATCTGCAT 675 >seq21712 Length=99785 Score = 104 bits (114), Expect = 1e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || ||||||| || | || | ||| ||||| | ||||| || || |||||||| ||| Sbjct 91297 CCTCCTCTCAGTCGGAGGACAAGATGAAGAGTAGTTTCTTTCTGAATATTGTAATCAGAG 91238 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 |||| | | | ||||| || ||||| |||||| | | ||| |||||||| | || Sbjct 91237 AGTGATCTGCCATTTTCCAACTGCTTTCCAGCAAAACTGAGACGTTGCTGATCAGGTGGA 91178 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCAC 33701 | |||||||| || |||||| ||| | || | ||| ||||| || | ||| || Sbjct 91177 ATGCCTTCTTTTTCTTGAATTTT-TGTCTTCACGTTTTCAATAGTGTCACTGGGTTCAAC 91119 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | || || ||||||||||| ||||| || |||||||||||| Sbjct 91118 TTCCAAAGTAATGGTTTTACCTGTAGGGGTTTTGACGAAGATCTGCATA 91070 >seq47141 Length=13405 Score = 102 bits (112), Expect = 5e-17 Identities = 165/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||| |||||| || || | || | || | ||| ||| || || |||||||| || | Sbjct 4941 CACAACCTCTAAAGCGAAGGACAAGGTGCAAAGTTGACTCCTTCTGAATGTTGTAGTCAG 5000 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | |||||||| | || || | ||| ||||| ||||||||||| |||||||||| | | Sbjct 5001 AAAGTGTGCGACCATCTTCAAGTTGCTTTCCAGCAAAAATCAAGCGCTGCTGATTAGGAG 5060 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | ||||| ||| |||||| |||| ||| || | || ||| | ||| Sbjct 5061 GAATGCCTTCCTTGCTTTGAATTTTTACTTTC-CCATTTTCAATTGTATCGGAAGGTTCA 5119 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTTG 33754 || || | ||||| ||||| ||||| | ||||| ||||| |||||||| |||| Sbjct 5120 ACCTCTAGGGTGATGGTTTTCCCTGTGAGGGTTTTCACAAAAATCTGCATGGTTG 5174 >seq215054 Length=1089 Score = 98.7 bits (108), Expect = 6e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 || || || |||||||| || || ||||| || | || ||||| || ||||| |||||| Sbjct 180 TCCTTCTGAATGTTGTAGTCCGAAAGTGTACGGCCATCTTCCAACTGCTTTCCTGCAAAA 239 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 |||| ||| ||||| ||| |||| | ||||||||| || || || || | ||| Sbjct 240 ATCAGACGTTGCTGGTCTGGCGGTATACCTTCTTTATCCTGTATCTTGGCCTTGA-CATT 298 Query 33679 GTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 ||| |||||| || | ||||| || | || || || || || || | || ||||| Sbjct 299 TTCAATGGTGTCACTGGGCTCCACTTCCAGGGTTATGGTCTTGCCAGTCAGGGTCTTTAC 358 Query 33738 AAAGATCTGCATA 33750 |||||||||||| Sbjct 359 GAAGATCTGCATA 371 Score = 86.0 bits (94), Expect = 4e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 33538 AACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCG 33597 || |||| ||| || || || ||||| ||||| || || ||||| || ||| | || Sbjct 627 AAGACCAGATGAAGTGTTGATTCCTTTTGGATGTTATAGTCTGAGAGGGTACGTCCATCC 686 Query 33598 TCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCG 33657 || | ||||| || ||||| || | | ||| ||||| | || | |||||||| || Sbjct 687 TCTAGCTGTTTGCCCGCAAATATAAGCCTCTGTTGATCAGGGGGAATGCCTTCTTTATCT 746 Query 33658 GCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCACGTCAACCGTGATCGT 33716 ||||| ||| | ||| ||| ||||| || | |||||| |||| || || || Sbjct 747 TGGATTTTAGCTTTTA-CATTTTCAATTGTGTCACTAGGTTCCACTTCAAGGGTAATAGT 805 Query 33717 TTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || || || || || ||||||||||||||| Sbjct 806 CTTGCCAGTCAAGGTCTTCACAAAGATCTGCATA 839 >seq1581887 Length=215 Score = 91.5 bits (100), Expect = 9e-14 Identities = 110/147 (75%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 33604 TGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATT 33663 ||||| || ||||||||||| | |||||||||| | || | |||||||| || ||| Sbjct 1 TGTTTGCCAGCAAAAATCAACCTCTGCTGATCTGGTGGGATGCCTTCTTTATCTTGGATT 60 Query 33664 TTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACC 33722 || ||||| ||| ||| ||||| |||| |||||| || | || || |||||||| Sbjct 61 TTTGCTTTCA-CATTTTCAATCGTGTCACTTGGTTCCACTTCCAGTGTAATTGTTTTACC 119 Query 33723 TGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || ||||||||||| Sbjct 120 AGTGAGTGTTTTCACGAAGATCTGCAT 146 >seq420093 Length=5408 Score = 87.8 bits (96), Expect = 1e-12 Identities = 127/177 (72%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 33574 TAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGA 33633 || || || || || ||| | || || | || ||||| |||||||| | |||||||||| Sbjct 3689 TAGTCCGACAGGGTACGTCCATCTTCAAGCTGCTTTCCAGCAAAAATGAGACGCTGCTGA 3748 Query 33634 TCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCT 33692 || | || | ||||||||| || ||| || || | |||| || | || || || Sbjct 3749 TCAGGAGGAATACCTTCTTTATCCTGAATCTT-TGCCTTCACATTTTCAATAGTATCACT 3807 Query 33693 TGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || ||| || |||| || || || || || ||||| ||||| ||||| |||||||| Sbjct 3808 TGTTTCAACCTCAAGTGTTATAGTCTTCCCAGTTAAAGTTTTCACAAAAATCTGCAT 3864 >seq329421 Length=21321 Score = 86.0 bits (94), Expect = 4e-12 Identities = 107/146 (73%), Gaps = 2/146 (1%) Strand=Plus/Plus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || ||||| | || ||| | || ||||| ||||| || ||||| ||| Sbjct 18599 AAAATCTGCATCCCACCACGCAGACGCAGTACTAAATGCAGAGTAGATTCCTTTTGAATG 18658 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 || ||||| || || ||||| | || || | || ||||| |||||||||| ||||||| Sbjct 18659 TTATAATCTGACAGAGTGCGACCATCTTCAAGCTGCTTTCCAGCAAAAATCAGACGCTGC 18718 Query 33631 TGATCTTGCGGCACACCTTCTTTGTC 33656 ||||| | || | |||||| || || Sbjct 18719 TGATCAGGAGGAATACCTTCCTTATC 18744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 308727381624000