Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq197271 109 5e-19 seq4952844 96.9 3e-15 seq990654 96.9 3e-15 seq21712 82.4 6e-11 >seq197271 Length=6114 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 25202 GGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATCGAGCAAGTAAAACAAAAA 25261 || ||| | || || | ||||| ||| ||| || ||||| || | || || |||| Sbjct 1388 GGTAAAACCATTACTTTGGAAGTTGAACCCAGTGACACTATAGAAAACGTGAAGGCAAAA 1447 Query 25262 ATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAA 25321 ||| |||||||| || || || || ||||||||| | ||||||| | || ||||| Sbjct 1448 ATTCAAGATAAAGAAGGCATTCCACCTGATCAGCAACGTCTCATTTTTGCAGGAAAACAG 1507 Query 25322 CTCGAAGATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTA 25381 | ||||||| |||| || |||||||||||||| |||||||| || ||||| | Sbjct 1508 TTGGAAGATGGCAGAACACTCTCTGATTACAATATTCAGAAAGAATCTACTCTTCATCTT 1567 Query 25382 GTGTTAAGATTGAGAGGAGGAAA 25404 || | ||| |||||||||| || Sbjct 1568 GTCCTCAGACTGAGAGGAGGCAA 1590 >seq4952844 Length=1519 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 25202 GGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATCGAGCAAGTAAAACAAAAA 25261 || ||| | || || | ||||| ||| ||| || || |||||| | || || |||| Sbjct 23 GGTAAAACCATTACTTTGGAAGTTGAACCCAGTGACACCATCGAGAATGTGAAGGCAAAA 82 Query 25262 ATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAA 25321 ||| |||||||| || || || || ||||| || | ||||||| | || || || Sbjct 83 ATTCAAGATAAAGAAGGCATTCCACCTGATCAACAGCGTCTCATTTTTGCTGGAAAGCAG 142 Query 25322 CTCGAAGATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTA 25381 | ||||||| |||| || ||||| |||||||| ||||||||||| ||||| | Sbjct 143 TTGGAAGATGGCAGAACACTCTCAGATTATAATATTCAGAAAGAATCCACACTTCATCTT 202 Query 25382 GTGTTAAGATTGAGAGGAGGAAA 25404 || | || |||||||||| || Sbjct 203 GTCCTCAGGCTGAGAGGAGGCAA 225 >seq990654 Length=1195 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 25202 GGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATCGAGCAAGTAAAACAAAAA 25261 || ||| | || || | ||||| ||| ||| || ||||| ||| | || || |||| Sbjct 987 GGTAAAACCATTACTCTTGAAGTGGAACCCAGTGACACTATTGAGAATGTGAAGGCAAAA 1046 Query 25262 ATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAA 25321 ||| |||||||| || || || || ||||||||| | || |||| | || || || Sbjct 1047 ATTCAAGATAAAGAAGGCATTCCACCTGATCAGCAACGTCTTATTTTTGCTGGAAAGCAG 1106 Query 25322 CTCGAAGATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTA 25381 || ||||||| |||| || || ||||||||||| ||||| || || | ||| | Sbjct 1107 CTGGAAGATGGCAGAACACTCTCAGACTACAATATTCAGAAAGAGTCAACTCTCCATCTT 1166 Query 25382 GTGTTAAGATTGAGAGGAGGAAA 25404 || | ||| |||||||||| || Sbjct 1167 GTCCTCAGACTGAGAGGAGGCAA 1189 >seq21712 Length=99785 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | || || ||||| || || ||| | || || | ||||| ||| ||| Sbjct 91071 ATGCAGATCTTCGTCAAAACCCCTACAGGTAAAACCATTACTTTGGAAGTTGAACCCAGT 91130 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || ||||| || | || || ||||||| || ||||| || || || || |||||| Sbjct 91131 GACACTATTGAAAACGTGAAGACAAAAATTCAAGAAAAAGAAGGCATTCCACCTGATCAG 91190 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| | |||| || | || || || | ||| ||| ||| || ||||||||| Sbjct 91191 CAACGTCTCAGTTTTGCTGGAAAGCAGTTGGAAAATGGCAGATCACTCTCTGATTACAAT 91250 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAA 25404 ||||| |||||| | || ||||| | || | || |||||||||| || Sbjct 91251 ATTCAGAAAGAAACTACTCTTCATCTTGTCCTCCGACTGAGAGGAGGCAA 91300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418047290617475