Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq215054 120 2e-22 seq3343411 89.7 4e-13 seq1187548 87.8 1e-12 seq197271 82.4 6e-11 >seq215054 Length=1089 Score = 120 bits (132), Expect = 2e-22 Identities = 161/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || ||||| || || |||||||||||||| |||||| | ||| ||||| | Sbjct 838 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACTATTACCCTTGAAGTGGAACCTAGT 779 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | || ||| ||||| || ||||||||| | ||| ||||||| Sbjct 778 GACACAATTGAAAATGTAAAAGCTAAAATCCAAGATAAAGAAGGCATTCCCCCTGATCAA 719 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || |||||||| | |||||||||||| |||| ||| || | || || ||| Sbjct 718 CAGAGGCTTATATTTGCGGGCAAACAGCTAGAGGATGGACGTACCCTCTCAGACTATAAC 659 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGG 106483 || ||||| ||||| ||||| ||| | || ||||||||||| || Sbjct 658 ATCCAAAAGGAATCAACACTTCATCTGGTCTTGAGGTTACGTGG 615 >seq3343411 Length=310 Score = 89.7 bits (98), Expect = 4e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 106268 TTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGCGATTCTGT 106327 |||||| || || | ||||| |||||||||||| | ||| ||||| | || | | Sbjct 310 TTTTGTGAAGACTCTAACTGGTAAGACCATTACCCTTGAAGTGGAACCTAGTGACACGAT 251 Query 106328 TGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCT 106387 | | || ||| ||||| || ||||||||| | ||| ||||| || ||||| Sbjct 250 AGAAAATGTAAAAGCTAAAATCCAAGATAAAGAAGGCATTCCCCCAGATCAGCAGAGGCT 191 Query 106388 TATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAACATACAAAA 106447 ||| | ||| |||||||| |||| ||| || | || || ||||| ||||| Sbjct 190 TATATTTGCAGGCAAACAGCTAGAGGATGGACGCACCCTCTCAGACTATAACATCCAAAA 131 Query 106448 AGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 ||||| ||||| ||| | || ||||||||||| || || Sbjct 130 GGAATCAACACTTCATCTGGTCTTGAGGTTACGTGGTGG 92 >seq1187548 Length=1734 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 106251 AGTTTAAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACA 106310 || |||| |||||||| |||||||||||| | |||||||||||||| || | || Sbjct 376 AGGTTAACCATGCAAATCTTTGTTAAAACACTCACTGGCAAGACCATCACACTTGAGGTG 435 Query 106311 GAACCCGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCC 106370 ||||| | || | | | | ||||| ||||| || |||||||| | || Sbjct 436 GAACCAAGTGACACAATAGAAAATGTGAAGGCTAAAATCCAGGATAAAGAAGGAATTCCA 495 Query 106371 GTTGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGC 106430 ||| ||||| ||||| |||| ||| |||||||| || |||||| || || Sbjct 496 CCTGACCAACAGAGGCTGATTTTTGCTGGCAAACAGTTGGAAGATGGACGCACCTTGTCT 555 Query 106431 GATTACAACATACAAAAAGAATCTACACTACATTTAGT 106468 ||||| || || |||||||| || || | ||||| || Sbjct 556 GATTATAATATTCAAAAAGAGTCCACTTTGCATTTGGT 593 >seq197271 Length=6114 Score = 82.4 bits (90), Expect = 6e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 106287 GGCAAGACCATTACCGTGGAAACAGAACCCGGCGATTCTGTTGGCCAAGTGAAACAAAAA 106346 || || |||||||| ||||| |||||| | || || | | | ||||| |||| Sbjct 1388 GGTAAAACCATTACTTTGGAAGTTGAACCCAGTGACACTATAGAAAACGTGAAGGCAAAA 1447 Query 106347 ATTGCCGACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCTTATTTATGCGGGCAAACAA 106406 ||| || ||||||||| | || |||||| ||| | || |||| ||| || ||||| Sbjct 1448 ATTCAAGATAAAGAAGGCATTCCACCTGATCAGCAACGTCTCATTTTTGCAGGAAAACAG 1507 Query 106407 TTAGAAGATTCTAAAACTATGGGCGATTACAACATACAAAAAGAATCTACACTACATTTA 106466 || |||||| | ||| | |||||||| || || ||||||||||| || ||| | Sbjct 1508 TTGGAAGATGGCAGAACACTCTCTGATTACAATATTCAGAAAGAATCTACTCTTCATCTT 1567 Query 106467 GTATTGAGGTTACGAGGAGG 106486 || | || | ||||||| Sbjct 1568 GTCCTCAGACTGAGAGGAGG 1587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 377878468037600