Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq28755 147 3e-30 seq438317 141 1e-28 seq326921 140 4e-28 seq1060095 125 9e-24 seq17242 100 4e-16 seq70167 95.1 2e-14 seq3622457 93.3 5e-14 seq2444859 93.3 5e-14 seq314876 89.7 7e-13 seq780981 84.2 3e-11 >seq28755 Length=37593 Score = 147 bits (162), Expect = 3e-30 Identities = 316/458 (69%), Gaps = 22/458 (5%) Strand=Plus/Minus Query 87088 ACCATGAACGGAGGACACATTCAATTGATAATCGGTCCTATGTTTTCCGGTAAAAGTACA 87147 |||||||| ||| || |||||| | || |||| || | || |||||||||| || Sbjct 16082 ACCATGAA---AGGTCAAATTCAAATTATTTGCGGTTCTTTCTTCTCCGGTAAAACCACC 16026 Query 87148 GAACTTATTAGAAGAGTTAGACGGTATCAGATAGCACAATAT-AAATGCATAACCATAAA 87206 ||| | ||| | ||| | | ||| ||||| || ||| || || |||||| | | | || Sbjct 16025 GAATTAATTCGGAGAATAAAACGTTATCAAATTGCA-AAGATGAAATGCCTTATTAGAAG 15967 Query 87207 ATATACTAATGATACTAGATATGGAACA---GGATTATGGACTCATGATAAACATAATTT 87263 |||| ||||||||| ||||||| | || | |||| | ||||| ||| | | Sbjct 15966 ATATGCTAATGATAATAGATATAGCTCAAATGCATTAG---CACATGACGGACAAACACT 15910 Query 87264 CTCTGCTATGGAAACGACTAAATTACTGAATATAATTGATGCA-GTTACTGATTTCTCCG 87322 || || || | || |||||| || || || ||||| |||| ||| || | Sbjct 15909 TTCAGCAATTTCCGCTACAAAATTA----ATTTATTTAATGCACGTTA-TGAATTATGAT 15855 Query 87323 -TGATAGGTATAGACGAGGGTCAGTTCTTCCCAGACATAGTGGAATTCTGC-GAATACAT 87380 | || ||||||||||| | ||||| || |||||||| || || ||| ||| | || Sbjct 15854 ATTATCGGTATAGACGAAGCACAGTTTTTTCCAGACATTGTAACGTT-TGCAGAAGAAAT 15796 Query 87381 GGCAAACAATGGAAAAATAGTTAT-AGTGGCTGCATTAGATGGAACATTTCAACGAAAAC 87439 ||| || | ||||||||| |||| | || ||| | | |||||||||||| | || || Sbjct 15795 GGCCAATCAAGGAAAAATAATTATCATTGCCTGTCTAA-ATGGAACATTTCGAAGAGAAG 15737 Query 87440 CATTTACAACTATTTCGAATCTTATTCCGTTATCCGAAATGGTAGTAAAACTGACAGCGG 87499 | || || ||| | |||||| ||||| ||| |||||| || |||||| | || | Sbjct 15736 CTTTCGGAAATATCTTGAATCTAATTCCATTAGCCGAAAGCGTGGTAAAATTATATGCTG 15677 Query 87500 TATGTATGAAATGCTTTAAAGAGGCGTCGTTTTCTAAA 87537 | |||||| || ||| ||||||| |||||| | ||| Sbjct 15676 TCTGTATGTCGTGTTTTCAAGAGGCTTCGTTTACAAAA 15639 >seq438317 Length=14545 Score = 141 bits (156), Expect = 1e-28 Identities = 152/201 (76%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 39999 CCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAA 40058 ||| ||||||||| || || ||||||||||| |||||||| || | | ||| ||| | Sbjct 3414 CCAGATTTTCATTAACAATACCATCACTAGCAGCAAAAAAGGCTAGGATATGCGAAATGA 3473 Query 40059 AATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCTTTTGATATATCTACTT 40118 ||| |||| | | | ||||| ||||||| | ||||||||| | ||| |||| Sbjct 3474 AATGCCTTTCTGTAGATTTTAATTTCCCCCAGTCAGCTAAATCTTTTGAGAGATCCACTT 3533 Query 40119 CTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCCATATATCACGATATT 40178 ||||||| |||||||| || || |||||||| |||||||| | ||| |||||| |||| | Sbjct 3534 CTTCAGCAGTCCAAAATGATGCTTCTGCCTTCTTGTACATTTGCCAAATATCAGGATACT 3593 Query 40179 GTATTGGAAAAATAACAAATC 40199 || || ||||| ||||||| Sbjct 3594 CGATGGGGAAAATTACAAATC 3614 >seq326921 Length=5948 Score = 140 bits (154), Expect = 4e-28 Identities = 247/350 (71%), Gaps = 20/350 (6%) Strand=Plus/Minus Query 39824 TTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTA 39883 ||||| | |||| ||||||| |||||||| | | |||| | | ||||| | Sbjct 5167 TTTACGTACGGCAACGTTTCTACGGCATTAAATGAAAACAATTTTACGACTTTATCTCGA 5108 Query 39884 ACATATGTATCTATTAACA-GACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTG 39942 | ||||||||| ||||| | |||| ||||| |||||||| || ||||| || || | | Sbjct 5107 ATATATGTATC-ATTAAGAAGACTGTACATCTCTGAATGAATATTTTCTATAGCATTTTA 5049 Query 39943 AAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTC-TGAACAAAATCTTTCCGCCA 40001 ||| || || ||||||| ||||||||| | |||| || || ||| | | Sbjct 5048 AAA--CG------CACTGTGCTTCAAGAATTTGTACTTTGTGAATGAA-TCGTTCTACTA 4998 Query 40002 AATTTT-CATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAA 40060 |||||| || ||||||||||||||||||| |||||||||| || | | |||||| ||| Sbjct 4997 AATTTTTCACTCACTATTCCATCACTAGCTGCAAAAAATGTTAAAATGTATTTAATGAAA 4938 Query 40061 TATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCT 40120 || | ||||| | || || || |||| || |||| |||| | ||| |||||| Sbjct 4937 TACTGTTCATTGACCGT-AAGTTGTTCC---CAATGAT---TTTTCCCAAATCAACTTCT 4885 Query 40121 TCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCCATATATC 40170 || | |||||||| | || | || || || |||||| |||||| ||| Sbjct 4884 TCTACAGTCCAAAAGAAAGCAACAGCTTTCTTATACATGGTCCATAAATC 4835 >seq1060095 Length=681 Score = 125 bits (138), Expect = 9e-24 Identities = 154/208 (74%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 68946 TGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAA 69005 |||||| | |||||||||||| | ||| | | || |||| |||||| ||||| || | Sbjct 413 TGATCCTTCATATGTTTCATATGTTCCATATTTCTCGGCTAATTCACAGCTTGCTTCAAG 472 Query 69006 TGCACCGTAATAAATTGTTTCGAAAATCTTCT-TATTGAGATCTTGTGCTTCTAGACTAT 69064 | | | |||||||| ||||| ||||| |||| |||| || | |||||||| ||| | Sbjct 473 GGAAGCATAATAAATAGTTTCAAAAAT-TTCTATATTAAGCTTCTGTGCTTCCTCACTGT 531 Query 69065 CGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAG 69124 | || ||||| || | |||||| | ||||||||| || ||||| || || || || | Sbjct 532 CAAAGGGATACCTTAGCAAAATAAAGGTATCTGCCAAACCTTGAACTCCTATTCCAATTG 591 Query 69125 GTCTATGTCTCTTATTTGAACTTTCAGC 69152 ||| ||| || |||||||| | ||||| Sbjct 592 GTCGATGCCTTTTATTTGATTTCTCAGC 619 >seq17242 Length=2525 Score = 100 bits (110), Expect = 4e-16 Identities = 154/219 (70%), Gaps = 3/219 (1%) Strand=Plus/Minus Query 39643 ATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAG 39702 ||| ||||| || | ||| ||| || || || || ||||| || || | || || || Sbjct 2214 ATCCCTACTGATAAGTTCATTACTGAAGGTAAGACCTGGCATAAGTCCTCTTTTCTTAAG 2155 Query 39703 CCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAAC 39762 ||||||||| | ||||| || ||||| ||||| || ||||| || || ||||| ||| | Sbjct 2154 CCAAAATATTGACGCAAAGGAACCAGAGAAGAAAATTCCTTCAACAGCAGCAAAAGCAGC 2095 Query 39763 AAGTCTCTCTCCGTAACTTGTATCA---TTATGTATCCACTTCTGTGCCCAATCAGCTTT 39819 | ||| || || | || || | | || ||||| ||| |||||| |||| || Sbjct 2094 TACTCTTTCACCAAATGATGCATTAGTGTGATTAATCCAGTTCAAAGCCCAAACAGCCTT 2035 Query 39820 CTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAG 39858 |||||| | ||| || | ||||| || ||||| || || Sbjct 2034 CTTCTTAATACATGGGAGAGTTTCAATGGCATTGAACAG 1996 >seq70167 Length=66857 Score = 95.1 bits (104), Expect = 2e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 68719 TGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 68778 ||||| || |||||||| ||||| || | || | ||| || || ||||| || | ||| Sbjct 30011 TGAAACTCTCCAGATAATACTCTTCGGATATAGAAATTGCTAGTGTATGGCTCAATAGAC 30070 Query 68779 TCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTA 68838 ||||||||||| ||||| || ||||| || || |||||||| || || | | ||||| Sbjct 30071 TCATTATTTCCAAGAATCTGTGCAGTCGAAGCTGTTGGCATTGGAGCTATTAGCAAACTG 30130 Query 68839 TTTCTAAGACCATGT 68853 || || | ||||||| Sbjct 30131 TTCCTTACACCATGT 30145 Score = 93.3 bits (102), Expect = 5e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 69325 ATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTG 69384 || ||||||||||||||||| || ||||| || || | ||||||||||| || | Sbjct 49987 ATTTCTGTACATAGATTACTGCACTTGATGGTTCCTAAGTTTTGCTGATTTGATTTACGG 50046 Query 69385 TTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAAT 69443 ||||| || || || || || || | ||||| ||||||||||||||||| || ||||| Sbjct 50047 TTACATGCATCTTTATAGAGCATGTAAGGAGTGCCAGTTTCAATCTGAGAGTCAATAAT 50105 >seq3622457 Length=345 Score = 93.3 bits (102), Expect = 5e-14 Identities = 157/222 (71%), Gaps = 4/222 (2%) Strand=Plus/Plus Query 69497 CATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATT 69556 |||| | ||||||||| || ||||| |||||| ||||| | ||| || |||| Sbjct 118 CATACTTTGTATATAGTTCCTCAAATTCTGTTCCCCAGGTATCATGAAGTCCTGGGCATT 177 Query 69557 CATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGG 69616 ||| |||||||| | ||||| ||||| | | |||| ||||| || ||||| | Sbjct 178 CATGGGGACACATAAGGCTCCACATTTCATCCTTTTCCACTCTGTTCATGAAGAGATCTG 237 Query 69617 GAATCCAAAGAGCTATA-AAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttt- 69674 | ||||| || || ||| || ||||| | | ||||| ||||| || |||||||| Sbjct 238 GGATCCACAGGGC-ATAGAACAGATCACGAGCTCTATGCTCTTCTGAGCCAGTATTTTTC 296 Query 69675 tttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTC 69716 |||||| | ||||||| | | |||| | ||||||||||| Sbjct 297 TTTAAGTCCAAGAAACTAAAGA-TATCTGCGTGCCATGGTTC 337 >seq2444859 Length=247 Score = 93.3 bits (102), Expect = 5e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 68449 TAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGAT 68508 || || ||||||||||| ||||| |||| |||| || || ||||| | ||||| || Sbjct 246 TAAAAGTGCATACTTGTGAGTTTTCCATAATTTGGTTCAGCAATATGTACATTCAGAGAC 187 Query 68509 TGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGA 68568 || |||||||| || |||| || | || || |||||||| | || | | ||||| ||| Sbjct 186 TGGCTTTGATCAATATAAGCACCACGGTCAGCGGCCATTTTCAAAACATTTTTTTGTGGA 127 Query 68569 ATTTCCCAAATAGT 68582 |||||||| | ||| Sbjct 126 ATTTCCCATACAGT 113 >seq314876 Length=46846 Score = 89.7 bits (98), Expect = 7e-13 Identities = 152/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 87325 ATAGGTATAGACGAGGGTCAGTTCTTCCCAGACATAGTGGAATTCTGC-GAATACATGGC 87383 || ||||||||||| | ||||| || |||||||| || || | ||| ||| | ||||| Sbjct 32830 ATCGGTATAGACGAAGCACAGTTTTTTCCAGACATCGT-GACGTTTGCTGAAGAAATGGC 32888 Query 87384 AAACAATGGAAAAATAGTTAT-AGTGGCTGCATTAGATGGAACATTTCAACGAAAACCAT 87442 || | ||||||||| |||| | || ||| ||||| ||||| |||| | || || | | Sbjct 32889 CAATCAAGGAAAAATAATTATCATTGCCTG-TTTAGACGGAACTTTTCGAAGAGAAGCTT 32947 Query 87443 TTACAACTATTTCGAATCTTATTCCGTTATCCGAAATGGTAGTAAAACTGACAGCGGTAT 87502 | || ||| | | || | ||||||||| |||||| || |||||| | || || | Sbjct 32948 TCGGAAATATCTTGCATTTAATTCCGTTAGCCGAAAGCGTGGTAAAATTATATGCTGTCT 33007 Query 87503 GTATGAAATGCTTTAAAGAGGCGTCGTTTTCTAAA 87537 |||| | ||| |||| || || ||| | ||| Sbjct 33008 ATATGTCGCGTTTTCAAGAAGCTTCATTTACAAAA 33042 >seq780981 Length=1727 Score = 84.2 bits (92), Expect = 3e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698 ||||||| ||||| || | ||| ||| || || || || ||||| || || | || | Sbjct 148 CCTCATCCCTACTGATAAGTTCATTACTGAAGGTAAGACCTGGCATAAGTCCTCTTTTCT 89 Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758 | ||||||||||| | ||||| || ||||| ||||| || ||||| || || ||||| | Sbjct 88 TAAGCCAAAATATTGATGCAAAGGAACCAGAGAAGAAAATTCCTTCAACAGCAGCAAAAG 29 Query 39759 CAACAAGTCTCTCTCC 39774 || | | ||| || || Sbjct 28 CAGCTACTCTTTCACC 13 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 644092271883000