Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1187548 120 2e-22 seq420093 95.1 1e-14 seq215054 95.1 1e-14 seq197271 91.5 1e-13 seq21712 87.8 1e-12 seq3032665 84.2 2e-11 >seq1187548 Length=1734 Score = 120 bits (132), Expect = 2e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||||||| || || || |||||||||||||| || || || | |||| | ||||| Sbjct 1724 ACCAAATGCAAAGTGGACTCTTTTTGAATATTATAATCAGACAAGGTGCGTCCATCTTCC 1665 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 | |||||| || || | || || | ||||||||| || || | || |||||||| Sbjct 1664 AACTGTTTTCCAGCAAAGATCAGTCTCTGTTGATCTGGGGGAATGCCTTCTTTATCCTGA 1605 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| |||| |||| | ||||| | | ||| ||||| |||||||| | ||| Sbjct 1604 ATCTTAGCCTTCACATTTTCAATTGTGTCACTTGGTTCCACTTCAAGAGTTATTGTTTTA 1545 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || ||||| || ||||||||||| ||||| Sbjct 1544 CCAGTCAGTGTCTTCACAAAGATCTGCAT 1516 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||||||| || || || |||||||||||||| || || || | |||| | ||||| Sbjct 593 ACCAAATGCAAAGTGGACTCTTTTTGAATATTATAATCAGACAAGGTGCGTCCATCTTCC 534 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 | |||||| || || |||| || | |||||| || || || | || |||||||| | Sbjct 533 AACTGTTTGCCAGCAAAAATCAGCCTCTGTTGGTCAGGTGGAATTCCTTCTTTATCCTGG 474 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 || || |||| |||||| ||||| | | ||| || || || || || | ||| Sbjct 473 ATTTTAGCCTTCACATTTTCTATTGTGTCACTTGGTTCCACCTCAAGTGTGATGGTCTTG 414 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || ||||| |||||||||||||| Sbjct 413 CCAGTGAGTGTTTTAACAAAGATTTGCAT 385 >seq420093 Length=5408 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| ||||| || || || ||||||||||||| ||||| || || | ||| |||||| Sbjct 3710 TCTTCAAGCTGCTTTCCAGCAAAAATGAGACGCTGCTGATCAGGAGGAATACCTTCTTTA 3769 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||| |||| |||| | ||| || | | |||||| || || |||||| Sbjct 3770 TCCTGAATCTTTGCCTTCACATTTTCAATAGTATCACTTGTTTCAACCTCAAGTGTTATA 3829 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || || | |||||||||||| || ||||| Sbjct 3830 GTCTTCCCAGTTAAAGTTTTCACAAAAATCTGCAT 3864 >seq215054 Length=1089 Score = 95.1 bits (104), Expect = 1e-14 Identities = 156/225 (69%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 27024 CCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATG 27083 || || |||| ||| |||| ||| | || || || ||||| || || ||||| | | Sbjct 615 CCACGTAACCTCAAGACCAGATGAAGTGTTGATTCCTTTTGGATGTTATAGTCTGAGAGG 674 Query 27084 TTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACA 27143 | || | || || |||||||| || || | || || | ||||||||| || || | Sbjct 675 GTACGTCCATCCTCTAGCTGTTTGCCCGCAAATATAAGCCTCTGTTGATCAGGGGGAATG 734 Query 27144 CCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCT 27203 || |||||||| ||| || ||| | |||| | ||||| | | ||| ||||| Sbjct 735 CCTTCTTTATCTTGGATTTTAGCTTTTACATTTTCAATTGTGTCACTAGGTTCCACTTCA 794 Query 27204 AGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || |||| ||||| |||| || ||||||||||| |||||| Sbjct 795 AGGGTAATAGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATA 839 >seq197271 Length=6114 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 27018 TTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC- 27076 |||||||| | || | | || | ||| | ||||| ||||| ||||||||||| || Sbjct 1590 TTGCCTCCTCTCAGTCTGAGGACAAGATGAAGAGTAGATTCTTTCTGAATATTGTAATCA 1531 Query 27077 GCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGG 27136 | |||| || | ||||| | |||||| || || |||||||||| || ||||| || Sbjct 1530 GAGAGTGTTCTGC-CATCTTCCAACTGTTTTCCTGCAAAAATGAGACGTTGCTGATCAGG 1472 Query 27137 CGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTC 27196 || | || |||||||| || || |||| | |||||| |||||| ||| ||| Sbjct 1471 TGGAATGCCTTCTTTATCTTGAATTTTTGCCTTCACGTTTTCTATAGTGTCACTGGGTTC 1412 Query 27197 AACTTCTAGAGTTATAGATTTGCC 27220 |||||| | ||| || | ||| || Sbjct 1411 AACTTCCAAAGTAATGGTTTTACC 1388 >seq21712 Length=99785 Score = 87.8 bits (96), Expect = 1e-12 Identities = 160/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 27018 TTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC- 27076 |||||||| | || || | || | ||| | |||| ||||| ||||||||||| || Sbjct 91300 TTGCCTCCTCTCAGTCGGAGGACAAGATGAAGAGTAGTTTCTTTCTGAATATTGTAATCA 91241 Query 27077 GCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGG 27136 | || | || | | ||| | ||| || || || || ||||||| || ||||| || Sbjct 91240 GAGAGTGATCTGC-CATTTTCCAACTGCTTTCCAGCAAAACTGAGACGTTGCTGATCAGG 91182 Query 27137 CGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTC 27196 || | || ||||| || || || | |||| | |||| | |||||| ||| ||| Sbjct 91181 TGGAATGCCTTCTTTTTCTTGAATTTTTGTCTTCACGTTTTCAATAGTGTCACTGGGTTC 91122 Query 27197 AACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 |||||| | ||| || | ||| || || | ||||| || ||||| |||||| Sbjct 91121 AACTTCCAAAGTAATGGTTTTACCTGTAGGGGTTTTGACGAAGATCTGCATA 91070 >seq3032665 Length=281 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/228 (68%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || ||||||| |||||| | | | || || || ||||| ||||||||||| | Sbjct 52 CCACCACGCAACCTCAATACTAGAAGCAATGTTGACTCTTTCTGAATATTGTAATATGAA 111 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGC-GTAAATGAGACGCTGTTGATCCGGCGG 27139 | |||| | ||||| ||||| || || || |||| || | ||| ||||| || || Sbjct 112 AAAGTGCGACCATCTTCAAGCTGCTTCCCTGCAAAAAATCAGTCTCTGCTGATCTGGTGG 171 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||| ||||||| || ||| |||| |||| | || || ||| ||||| Sbjct 172 TATACCTCCTTTATCCTGTATTTTGGCCTTCACATTTTCAATGGTATCGCTGGGCTCAAC 231 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 |||| || || | ||||| ||||| || ||||| ||||| || || Sbjct 232 ATCTAATGTAATTGTCTTGCCAGTCAGTGTCTTCACGAAGATCTGTAT 279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399109486571400