Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq2316783 102 5e-17 seq329421 98.7 6e-16 seq47141 95.1 7e-15 seq2837514 91.5 9e-14 seq215054 91.5 9e-14 seq4730498 86.0 4e-12 >seq2316783 Length=240 Score = 102 bits (112), Expect = 5e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||| ||| | ||| ||||| ||||||||||||||||||||||| || || || Sbjct 151 AGACGCAGCACAAGATGCAGAGTTGATTCCTTTTGAATGTTATAATCTGACAGCGTGCGA 92 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||||||||| || || || ||||| || | |||||| ||||| || || | || ||| Sbjct 91 CCGTCTTCAAGCTGCTTTCCAGCAAAAATAAGACGCTGCTGGTCAGGAGGAATACCTTCC 32 Query 34609 TTGTCTGTGATCTT 34622 || ||| ||||| Sbjct 31 TTATCTTGAATCTT 18 >seq329421 Length=21321 Score = 98.7 bits (108), Expect = 6e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||| || ||||| ||||| ||||||||||||||||||||||| || || || Sbjct 18620 AGACGCAGTACTAAATGCAGAGTAGATTCCTTTTGAATGTTATAATCTGACAGAGTGCGA 18679 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | |||||||| || || || ||||| || | |||||| || || || || | || ||| Sbjct 18680 CCATCTTCAAGCTGCTTTCCAGCAAAAATCAGACGCTGCTGATCAGGAGGAATACCTTCC 18739 Query 34609 TTGTCTGTGATCTT 34622 || ||| |||||| Sbjct 18740 TTATCTTGGATCTT 18753 >seq47141 Length=13405 Score = 95.1 bits (104), Expect = 7e-15 Identities = 139/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574 |||||| |||||||| || || |||||||| || | ||||||||||| || || ||||| Sbjct 4978 CTCCTTCTGAATGTTGTAGTCAGAAAGTGTGCGACCATCTTCAAGTTGCTTTCCAGCAAA 5037 Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-G 34633 || || ||||| || | || || | || |||||| || ||| |||| ||| | Sbjct 5038 AATCAAGCGCTGCTGATTAGGAGGAATGCCTTCCTTG-CTTTGAATTTTTACTTTCCCAT 5096 Query 34634 ATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693 | |||||| || || || || | ||| || ||||| || || | ||||||| Sbjct 5097 TTTCAATTGTATCGGAAGGTTCAACCTCTAGGGTGATGGTTTTCCCTGTGAGGGTTTTCA 5156 Query 34694 CAAAAATCTGCATG 34707 |||||||||||||| Sbjct 5157 CAAAAATCTGCATG 5170 >seq2837514 Length=268 Score = 91.5 bits (100), Expect = 9e-14 Identities = 136/192 (71%), Gaps = 1/192 (1%) Strand=Plus/Plus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGC-AAA 34574 ||||| || ||||| || || ||||||||||| | ||||| |||||||| || || ||| Sbjct 11 TCCTTCTGGATGTTGTAGTCAGAAAGTGTTCGGCCATCTTCCAGTTGTTTCCCTGCAAAA 70 Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634 || | ||| || || || || || | || ||||| ||| |||||| || | Sbjct 71 AATCAGACGTTGCTGATCAGGAGGGATGCCTTCCTTATCTTGGATCTTAGCCTTGACATT 130 Query 34635 TAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694 | ||| ||||| |||||||||||| |||||| || || || || | || || || Sbjct 131 TTCAATGGTGTCACTAGTCTCCACTTCCAGGGTTATTGTCTTGCCAGTCAGGGTCTTTAC 190 Query 34695 AAAAATCTGCAT 34706 ||| || ||||| Sbjct 191 AAATATTTGCAT 202 >seq215054 Length=1089 Score = 91.5 bits (100), Expect = 9e-14 Identities = 164/240 (68%), Gaps = 29/240 (12%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||| || | ||| ||||| ||||||||||||||||| ||||| ||||| || Sbjct 849 AGACGCAGTACTAGATGCAGAGTAGATTCCTTTTGAATGTTATAGTCTGACAGTGTGCGA 908 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | |||||||| || || || ||||| || | ||| || ||||| || || | || ||| Sbjct 909 CCATCTTCAAGCTGCTTTCCTGCAAAAATCAGACGTTGCTGGTCAGGAGGAATACCTTCC 968 Query 34609 TTGTCTGT---------------GATCT----TTTG---TTTTAACGATAAAATTGTGTC 34646 || ||| ||||| |||| |||| |||| | ||| | Sbjct 969 TTATCTNNNNNNNNNNNNNNNTGGATCTTAGCTTTGACATTTT--CGAT---AGTGTCAC 1023 Query 34647 TTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || ||||| ||||| | || || |||||||| || || || |||||||| |||||||| Sbjct 1024 TTGGCTCT--ACTTCAAGAGTGATTGTTTTACCTGTCAAAGTCTTCACAAAGATCTGCAT 1081 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 ||||| |||||||| || || |||||||| || | ||||| | || || || ||||| Sbjct 180 TCCTTCTGAATGTTGTAGTCCGAAAGTGTACGGCCATCTTCCAACTGCTTTCCTGCAAAA 239 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC-TGTGATCTTTTGTTTTAACGA 34634 || | ||| || ||||| ||||| | || || || || ||| ||||| || | Sbjct 240 ATCAGACGTTGCTGGTCTGGCGGTATACCTTCTTTATCCTGT-ATCTTGGCCTTGACATT 298 Query 34635 TAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694 | ||| ||||| | ||||||||||| |||||| || || || || | || || || Sbjct 299 TTCAATGGTGTCACTGGGCTCCACTTCCAGGGTTATGGTCTTGCCAGTCAGGGTCTTTAC 358 Query 34695 AAAAATCTGCAT 34706 || |||||||| Sbjct 359 GAAGATCTGCAT 370 >seq4730498 Length=794 Score = 86.0 bits (94), Expect = 4e-12 Identities = 137/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574 |||||| |||||||| || || |||||||| || | ||||| | ||| || || | ||| Sbjct 484 CTCCTTCTGAATGTTGTAGTCAGAAAGTGTGCGACCATCTTCGAATTGCTTTCCAGAAAA 543 Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634 || || ||||| || || || | | || || ||||| ||| ||||| ||| ||| Sbjct 544 AATCAAGCGCTGCTGATCAGGAAGAATGCCTTCTTTGTCC-TGAATTTTTGCTTTCACGT 602 Query 34635 TAAAATT-GTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693 | ||| || || || || || | ||| || ||||| || || | ||||||| Sbjct 603 TTCCATTTGTATCAGAAGGTTCAACCTCTAGGGTGATGGTTTTCCCTGTGAGGGTTTTCA 662 Query 34694 CAAAAATCTGCATG 34707 |||||||||||||| Sbjct 663 CAAAAATCTGCATG 676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 295602260171975