Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq1187548 102 5e-17 >seq1187548 Length=1734 Score = 102 bits (112), Expect = 5e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||| ||||| ||||| || ||||| || || ||| |||| || ||| | Sbjct 385 ATGCAAATCTTTGTTAAAACACTCACTGGCAAGACCATCACACTTGAGGTGGAACCAAGT 444 Query 27850 GACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAG 27909 ||| || || || || ||||| || |||||||| |||| || || Sbjct 445 GACACAATAGAAAATGTGAAGGCTAAAATCCAGGATAAAGAAGGAATTCCACCTGACCAA 504 Query 27910 CAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAAC 27969 || || | |||||||| || ||||| ||||| || | ||||| |||||| ||||| || Sbjct 505 CAGAGGCTGATTTTTGCTGGCAAACAGTTGGAAGATGGACGCACCTTGTCTGATTATAAT 564 Query 27970 ATCCAAAAAGAGAGCACTTTGCATTTGGT 27998 || ||||||||| ||||||||||||||| Sbjct 565 ATTCAAAAAGAGTCCACTTTGCATTTGGT 593 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 |||||| || |||||||| || || ||||| ||| || || |||| || ||| | Sbjct 1515 AATGCAGATCTTTGTGAAGACACTGACTGGTAAAACAATAACTCTTGAAGTGGAACCAAG 1574 Query 27849 CGACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906 ||| || | ||| || || || || || |||||||| |||| || Sbjct 1575 TGACACAATTGAAAAT--GTGAAGGCTAAGATTCAGGATAAAGAAGGCATTCCCCCAGAT 1632 Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTAC 27966 || || | | || ||||| |||||||| ||||| || | ||||| |||||| ||||| Sbjct 1633 CAACAGAGACTGATCTTTGCTGGAAAACAGTTGGAAGATGGACGCACCTTGTCTGATTAT 1692 Query 27967 AACATCCAAAAAGAGAGCACTTTGCATTTGGT 27998 || || ||||||||| ||||||||||||||| Sbjct 1693 AATATTCAAAAAGAGTCCACTTTGCATTTGGT 1724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334235260205025