Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq1187548 118 7e-22 seq4730498 100 2e-16 seq47141 100 2e-16 seq4096420 95.1 8e-15 seq4952844 86.0 4e-12 seq1946777 82.4 5e-11 seq608707 82.4 5e-11 >seq1187548 Length=1734 Score = 118 bits (130), Expect = 7e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| || || || || || || || ||||| || ||||| ||||| || | | Sbjct 1515 AATGCAGATCTTTGTGAAGACACTGACTGGTAAAACAATAACTCTTGAAGTGGAACCAAG 1574 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||||| | || || ||| || |||||||| | || |||||||| Sbjct 1575 TGACACAATTGAAAATGTGAAGGCTAAGATTCAGGATAAAGAAGGCATTCCCCCAGATCA 1634 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||| | | || ||||| || ||||| ||||||| | |||||| || ||||| || Sbjct 1635 ACAGAGACTGATCTTTGCTGGAAAACAGTTGGAAGATGGACGCACCTTGTCTGATTATAA 1694 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 || |||||||||||||| || ||||| || Sbjct 1695 TATTCAAAAAGAGTCCACTTTGCATTTGGT 1724 Score = 107 bits (118), Expect = 1e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || |||||||| ||||| || || || ||||| || || || || | | Sbjct 385 ATGCAAATCTTTGTTAAAACACTCACTGGCAAGACCATCACACTTGAGGTGGAACCAAGT 444 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | |||| | || ||||| || |||||||| | || || || ||| Sbjct 445 GACACAATAGAAAATGTGAAGGCTAAAATCCAGGATAAAGAAGGAATTCCACCTGACCAA 504 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || ||||| |||||||| ||||||| | |||||| || ||||| || Sbjct 505 CAGAGGCTGATTTTTGCTGGCAAACAGTTGGAAGATGGACGCACCTTGTCTGATTATAAT 564 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGT 23819 || |||||||||||||| || ||||| || Sbjct 565 ATTCAAAAAGAGTCCACTTTGCATTTGGT 593 >seq4730498 Length=794 Score = 100 bits (110), Expect = 2e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || ||||||||||| || ||||| ||||| || || ||||| | | Sbjct 675 ATGCAGATTTTTGTGAAAACCCTCACAGGGAAAACCATCACCCTAGAGGTTGAACCTTCT 616 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || || || | ||| ||||||| ||||||||||| | | || ||||| Sbjct 615 GATACAAATGGAAACGTGAAAGCAAAAATTCAGGACAAAGAAGGCATTCTTCCTGATCAG 556 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| || || ||| | || || ||| | ||||| | ||||| | || |||||| Sbjct 555 CAGCGCTTGATTTTTTCTGGAAAGCAATTCGAAGATGGTCGCACACTTTCTGACTACAAC 496 Query 23791 ATACAAAAAGAGTCCACATT 23810 || || || ||||| || || Sbjct 495 ATTCAGAAGGAGTCAACTTT 476 >seq47141 Length=13405 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || ||||||||||| || ||||| ||||| || || ||||| | | Sbjct 5169 ATGCAGATTTTTGTGAAAACCCTCACAGGGAAAACCATCACCCTAGAGGTTGAACCTTCC 5110 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||||| ||| ||||||| ||| ||||| | || || |||| Sbjct 5109 GATACAATTGAAAATGGGAAAGTAAAAATTCAAAGCAAGGAAGGCATTCCTCCTAATCAG 5050 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| || || ||||| || || ||||| ||||| | ||||| | || |||||| Sbjct 5049 CAGCGCTTGATTTTTGCTGGAAAGCAACTTGAAGATGGTCGCACACTTTCTGACTACAAC 4990 Query 23791 ATACAAAAAGAGTCCACATTACA 23813 || || || ||||| || || || Sbjct 4989 ATTCAGAAGGAGTCAACTTTGCA 4967 >seq4096420 Length=439 Score = 95.1 bits (104), Expect = 8e-15 Identities = 144/204 (71%), Gaps = 1/204 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCAC-GGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||||| || ||||||||||| ||||||||| || | || || ||||| | | Sbjct 24 ATGCAGATTTTTGTCAAAACCCTCACAGGGAAAAACCATTGCCCTAGAGGTTGAACCTTC 83 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||||| | ||| ||||||| ||||| ||||| | | || ||||| Sbjct 84 TGATACAATTGAAAATGTGAAAGCAAAAATTCAGGACAAGGAAGGGATTCTTCCTGATCA 143 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| || || ||||| || || |||| ||||| | ||||| | | || ||| | Sbjct 144 GAAGCACTTGATTTTTGCTGGAAAGCAACCTGAAGATGGTCGCACACTTTGTGACTACCA 203 Query 23790 CATACAAAAAGAGTCCACATTACA 23813 ||| || || ||||| || || || Sbjct 204 CATTCAGAAGGAGTCAACTTTGCA 227 >seq4952844 Length=1519 Score = 86.0 bits (94), Expect = 4e-12 Identities = 141/201 (70%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 23638 GGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGA-AATATTAAAACAAAA 23696 || ||||| || ||| | |||||||| ||| ||||| | || ||| | || ||||| Sbjct 23 GGTAAAACCATTACTTTGGAAGTTGAACCCAGTGACACCATCGAGAATGTGAAGGCAAAA 82 Query 23697 AATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACA 23756 | || || |||||||| | || || |||||||||||| | || ||||| || || || Sbjct 83 A-TTCAAGATAAAGAAGGCATTCCACCTGATCAACAGCGTCTCATTTTTGCTGGAAAGCA 141 Query 23757 ACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTT 23816 ||||||| | | || | ||||| || || || ||||| |||||| | ||| | Sbjct 142 GTTGGAAGATGGCAGAACACTCTCAGATTATAATATTCAGAAAGAATCCACACTTCATCT 201 Query 23817 AGTTTTAAGGTTGCGAGGAGG 23837 || | ||| || ||||||| Sbjct 202 TGTCCTCAGGCTGAGAGGAGG 222 >seq1946777 Length=225 Score = 82.4 bits (90), Expect = 5e-11 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 23687 TAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTG 23746 ||||| |||| ||| | |||||||| | ||||| || |||||| | | ||||| | Sbjct 115 TAAAAGAAAAGATTCAACAGAAAGAAGGAATTCCGCCCGAACAACAGAGACTTATATTCG 56 Query 23747 CCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAGA 23801 |||| |||||||||||| | || ||||||||| || |||||||| | ||||| Sbjct 55 CCGGTAAACAACTGGAAAATGACCGCACTTTATCGGACTACAACATTAATAAAGA 1 >seq608707 Length=558 Score = 82.4 bits (90), Expect = 5e-11 Identities = 90/116 (78%), Gaps = 4/116 (3%) Strand=Plus/Plus Query 23707 AAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGAC 23766 |||||||| | || || ||||||||||| | |||||||| ||||||||| ||||||| Sbjct 443 AAAGAAGGAATTCCACCGGATCAACAGCGACTCATATTTGCAGGCAAACAATTGGAAGAT 502 Query 23767 GAACGCACTTTAGGCGATTACAACAT-AC-AAAAAGAGTCCACATTACATTTAGTT 23820 | ||| | ||| |||||| ||||| || ||| | ||| || || ||||||||| Sbjct 503 AATCGCTCGTTATCCGATTATAACATCACGAAAGACAGT--ACCTTGCATTTAGTT 556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 317467444180100