Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq438317 147 3e-30 seq1060095 131 2e-25 seq326921 118 1e-21 seq17242 105 9e-18 seq28755 95.1 2e-14 seq3622457 91.5 2e-13 seq2444859 89.7 7e-13 seq780981 89.7 7e-13 seq247341 82.4 1e-10 >seq438317 Length=14545 Score = 147 bits (162), Expect = 3e-30 Identities = 153/201 (76%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 48523 CCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAA 48582 ||| ||| ||||| || || |||||||||||||||||||| |||| | ||| ||| | Sbjct 3414 CCAGATTTTCATTAACAATACCATCACTAGCAGCAAAAAAGGCTAGGATATGCGAAATGA 3473 Query 48583 AATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTT 48642 ||| |||| | || | | ||| ||||||| | ||||||||| | ||| |||| Sbjct 3474 AATGCCTTTCTGTAGATTTTAATTTCCCCCAGTCAGCTAAATCTTTTGAGAGATCCACTT 3533 Query 48643 CTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACTGTATT 48702 ||||||| |||||||||||||| ||||| || || ||||| | ||| |||||| || | Sbjct 3534 CTTCAGCAGTCCAAAATGATGCTTCTGCCTTCTTGTACATTTGCCAAATATCAGGATACT 3593 Query 48703 GGATTGGGAAAATAACAAATC 48723 ||| |||||||| ||||||| Sbjct 3594 CGATGGGGAAAATTACAAATC 3614 Score = 96.9 bits (106), Expect = 5e-15 Identities = 85/106 (80%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 48401 ATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGC 48460 ||| || ||||| || || |||| ||||| |||||||| ||||| | |||||||||||| Sbjct 884 ATCCTTTACGTATGTGTCAATTAGCAGACTGTACATTTCAGAGTGGACATTTTCAATTGC 943 Query 48461 CATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCC 48506 ||||||||||| || || || | |||||||||| ||| || ||| Sbjct 944 AATCTGAAATCCATAGAAGCAGCGGGCTTCTGTGACCTGAACTTCC 989 >seq1060095 Length=681 Score = 131 bits (144), Expect = 2e-25 Identities = 150/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 77354 TGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAA 77413 |||||| | |||||||||||| | ||| | | | || |||| |||||| || ||||| | Sbjct 413 TGATCCTTCATATGTTTCATATGTTCCATATTTCTCGGCTAATTCACAGCTTGCTTCAAG 472 Query 77414 TGCTCCGTAATAAATTGTTTCGAAAATCTTCT-TATTGAGATCTTGTGCTTCAATACTAT 77472 | | |||||||| ||||| ||||| |||| |||| || | |||||||| ||| | Sbjct 473 GGAAGCATAATAAATAGTTTCAAAAAT-TTCTATATTAAGCTTCTGTGCTTCCTCACTGT 531 Query 77473 CAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAG 77532 |||| ||||| || | |||||||| |||||| || || |||||||| || ||||| | Sbjct 532 CAAAGGGATACCTTAGCAAAATAAAGGTATCTGCCAAACCTTGAACTCCTATTCCAATTG 591 Query 77533 GTCTATGTCTCTTATTGGA 77551 ||| ||| || ||||| || Sbjct 592 GTCGATGCCTTTTATTTGA 610 >seq326921 Length=5948 Score = 118 bits (130), Expect = 1e-21 Identities = 241/349 (69%), Gaps = 18/349 (5%) Strand=Plus/Minus Query 48348 TTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTA 48407 ||||| | |||| ||||||| |||||||| ||| |||| | ||||| | Sbjct 5167 TTTACGTACGGCAACGTTTCTACGGCATTAAATGAAAACAATTTTACGACTTTATCTCGA 5108 Query 48408 ACGTAAGTATCTATTAA-AAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTG 48466 | || ||||| ||||| |||||| ||||| || || ||||||||||| || || | | Sbjct 5107 ATATATGTATC-ATTAAGAAGACTGTACATCTCTGAATGAATATTTTCTATAGCATTTTA 5049 Query 48467 AAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAA 48526 ||| | || | | ||||| || ||||| | | |||||||| | || Sbjct 5048 AAACGC------AC-TGT-GCTTCAAGAATTTGTACTTTGTGAATGAATCGTTCTACTAA 4997 Query 48527 ATTCT-CATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAAT 48585 ||| | || | ||||||||||||||||| |||||||||| ||| | | |||||| |||| Sbjct 4996 ATTTTTCACTCACTATTCCATCACTAGCTGCAAAAAATGTTAAAATGTATTTAATGAAAT 4937 Query 48586 ATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTT 48645 | | ||| ||| || || || |||| || |||| |||| | ||| ||||||| Sbjct 4936 ACTGTTCATTGACCGTAAG-TTGTTCC---CAATGAT---TTTTCCCAAATCAACTTCTT 4884 Query 48646 CAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATC 48694 | | |||||||| | || | ||||| |||||||| |||||| ||| Sbjct 4883 CTACAGTCCAAAAGAAAGCAACAGCTTTCTTATACATGGTCCATAAATC 4835 >seq17242 Length=2525 Score = 105 bits (116), Expect = 9e-18 Identities = 162/223 (73%), Gaps = 11/223 (5%) Strand=Plus/Minus Query 48167 ATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAG 48226 ||| ||||| || | ||| ||| || || ||||| ||||| ||||| | ||| || || Sbjct 2214 ATCCCTACTGATAAGTTCATTACTGAAGGTAAGACCTGGCATAAGTCCTCTTTTCTTAAG 2155 Query 48227 CCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGT 48286 ||||||||||| ||| || || ||||| ||||| || ||||| || || ||||| || | Sbjct 2154 CCAAAATATTGACGCAAAGGAACCAGAGAAGAAAATTCCTTCAACAGCAGCAAAAGCAGC 2095 Query 48287 AAGTCTCTCTCCGTAACTG--GC-TTCGT-TG-TGTATCCACCGTT--GTGCCCAATCAG 48339 | ||| || || || || || || || || | ||||| ||| |||||| ||| Sbjct 2094 TACTCTTTCACC--AAATGATGCATTAGTGTGATTAATCCA--GTTCAAAGCCCAAACAG 2039 Query 48340 CCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAG 48382 |||||||||| | ||| || | ||||| || ||||| || || Sbjct 2038 CCTTCTTCTTAATACATGGGAGAGTTTCAATGGCATTGAACAG 1996 >seq28755 Length=37593 Score = 95.1 bits (104), Expect = 2e-14 Identities = 151/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 95785 ATAGGTATAGATGAGGGACAATTCTTTCCTGACATAGTAGAATTTTGTGAACTCATGGCA 95844 || |||||||| || | ||| || ||||| ||||| ||| ||| ||| ||||| Sbjct 15851 ATCGGTATAGACGAAGCACAGTTTTTTCCAGACATTGTAACGTTTGCAGAAGAAATGGCC 15792 Query 95845 AACAATGGAAAAATAGTTATAGTGGCAGCATTAGATGGAACATTTCAACGCAAGCCGTTT 95904 || | ||||||||| |||| | || || |||||||||||| | | || | || Sbjct 15791 AATCAAGGAAAAATAATTATCATTGCCTGTCTAAATGGAACATTTCGAAG--AGAAGCTT 15734 Query 95905 ACG--ACTATTTCGAATCTTATTCCGTTATCTGAAATGGTAGTAAAACTGACAGCAGTAT 95962 || | ||| | |||||| ||||| ||| | |||| || |||||| | || || | Sbjct 15733 TCGGAAATATCTTGAATCTAATTCCATTAGCCGAAAGCGTGGTAAAATTATATGCTGTCT 15674 Query 95963 GTATGAAGTGTTTTAAAGAGGCATCGTTTTCTAAA 95997 ||||| ||||||| ||||||| |||||| | ||| Sbjct 15673 GTATGTCGTGTTTTCAAGAGGCTTCGTTTACAAAA 15639 >seq3622457 Length=345 Score = 91.5 bits (100), Expect = 2e-13 Identities = 157/224 (70%), Gaps = 8/224 (4%) Strand=Plus/Plus Query 77905 CATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATT 77964 |||| | |||||||| |||||||| |||||| ||||| | ||| ||||||| Sbjct 118 CATACTTTGTATATAGTTCCTCAAATTCTGTTCCCCAGGTATCATGAAGTCCTGGGCATT 177 Query 77965 CATTTGGGCACATCAATGACCAG---TCACCATCTTCCTTAACTCGTTTCATAAAGAGAT 78021 ||| || ||||| | ||| ||| | | |||| |||| ||||| ||||||| Sbjct 178 CATGGGGACACATAAGGCTCCACATTTCATCCTTTTCC---ACTCTGTTCATGAAGAGAT 234 Query 78022 CAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCT 78081 | || ||||| || ||| || ||||| || | |||||| ||||| || ||||| | Sbjct 235 CTGGGATCCACAGGGCATAGAACAGATCACGAGCTCTATGCTCTTCTGAGCCAGTATTTT 294 Query 78082 T-TTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTC 78124 | |||||| | ||||||| | | |||| | ||||||||||| Sbjct 295 TCTTTAAGTCCAAGAAACTAAAGA-TATCTGCGTGCCATGGTTC 337 >seq2444859 Length=247 Score = 89.7 bits (98), Expect = 7e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 76857 TAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGAC 76916 || || ||||| ||||| ||||| |||| | || || || ||||| | ||||| ||| Sbjct 246 TAAAAGTGCATACTTGTGAGTTTTCCATAATTTGGTTCAGCAATATGTACATTCAGAGAC 187 Query 76917 TGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGA 76976 || |||||||| || |||| || | ||||| |||||||| | || | ||||| ||| Sbjct 186 TGGCTTTGATCAATATAAGCACCACGGTCAGCGGCCATTTTCAAAACATTTTTTTGTGGA 127 Query 76977 ATTTCCCAAATAGT 76990 |||||||| | ||| Sbjct 126 ATTTCCCATACAGT 113 >seq780981 Length=1727 Score = 89.7 bits (98), Expect = 7e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224 ||||| ||||| || | ||| ||| || || ||||| ||||| ||||| | ||| || Sbjct 146 TCATCCCTACTGATAAGTTCATTACTGAAGGTAAGACCTGGCATAAGTCCTCTTTTCTTA 87 Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283 ||||||||||||| || || || ||||| ||||| || ||||| || || ||||| || Sbjct 86 AGCCAAAATATTGATGCAAAGGAACCAGAGAAGAAAATTCCTTCAACAGCAGCAAAAGC 28 >seq247341 Length=25763 Score = 82.4 bits (90), Expect = 1e-10 Identities = 112/153 (73%), Gaps = 5/153 (3%) Strand=Plus/Minus Query 47796 TAAAAGTCAACATCTAAAGAAAAA---TGATTATC-TTCTTGAGACATAACTCCCATTTT 47851 ||||||||| |||| |||| ||| || | || |||||| | ||| ||||| || Sbjct 16441 TAAAAGTCAGCATCCAAAGTAAAGCAGTGGTCTTCCTTCTTG-GCCATTACTCCACACTT 16383 Query 47852 TTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 47911 ||||||||| | || || |||||||| |||||||| || |||| || | || Sbjct 16382 TTGATATTCTGCAACTTTCTTTTCGAAAAAGTTAGTTTTTCCCTCCAGACTGATGTGATC 16323 Query 47912 CATAAAATCAAATGGATTAACTGCATTATAAAT 47944 |||||||||||||||||| || |||| ||||| Sbjct 16322 CATAAAATCAAATGGATTTTCTACATTGTAAAT 16290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 651368574108000