Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq326921 150 2e-31 seq438317 129 8e-25 seq28755 109 7e-19 seq17242 104 3e-17 seq4470012 98.7 1e-15 seq3563114 98.7 1e-15 seq70167 95.1 2e-14 seq2444859 89.7 7e-13 >seq326921 Length=5948 Score = 150 bits (166), Expect = 2e-31 Identities = 254/357 (71%), Gaps = 22/357 (6%) Strand=Plus/Minus Query 46832 TTTTC--TTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATCACT 46889 ||||| ||||| | |||| ||||||| |||||||| ||| |||| | | | Sbjct 5174 TTTTCGTTTTACGTACGGCAACGTTTCTACGGCATTAAATGAAAACAATTTTACGACTTT 5115 Query 46890 ATCTTTAACATATGTATCTATTAA-AAGACTATACATTTCTGAATGAATGTTTTCAATAG 46948 |||| || ||||||||| ||||| |||||| ||||| ||||||||||| ||||| |||| Sbjct 5114 ATCTCGAATATATGTATC-ATTAAGAAGACTGTACATCTCTGAATGAATATTTTCTATAG 5056 Query 46949 CCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGT-ACAAAATCGT 47007 ||| | | ||| || ||||||| ||| |||| || ||| | |||||| Sbjct 5055 -CATTTTA-------AAACGCACTGTGCTTCAAGAATTTGTA-CTTTGTGAATGAATCGT 5005 Query 47008 TC-AGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTT 47066 || | || || ||| ||||||||||||||||||| |||||||||| || | | ||| Sbjct 5004 TCTACTAAATTTTTCACTCACTATTCCATCACTAGCTGCAAAAAATGTTAAAATGTATTT 4945 Query 47067 AATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATC 47126 ||| ||||| | ||||| | || || || |||| || |||| |||| | ||| Sbjct 4944 AATGAAATACTGTTCATTGACCGTAAG-TTGTTCC---CAATGAT---TTTTCCCAAATC 4892 Query 47127 TACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATC 47183 |||||||| | ||||| || | || | ||||| |||||||| |||||| ||| Sbjct 4891 AACTTCTTCTACAGTCCAAAAGAAAGCAACAGCTTTCTTATACATGGTCCATAAATC 4835 >seq438317 Length=14545 Score = 129 bits (142), Expect = 8e-25 Identities = 151/203 (74%), Gaps = 6/203 (3%) Strand=Plus/Plus Query 47013 CAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAA 47072 || ||| ||||| || || |||||||||||||||||||| || | | ||| ||| || Sbjct 3415 CAGATTTTCATTAACAATACCATCACTAGCAGCAAAAAAGGCTAGGATATGCGAAATGAA 3474 Query 47073 ATATTTTTCATCGGTAG---TCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTAC 47129 || |||| |||| | | ||| ||||||| | ||||||||| | ||| || Sbjct 3475 ATGCCTTTCT---GTAGATTTTAATTTCCCCCAGTCAGCTAAATCTTTTGAGAGATCCAC 3531 Query 47130 TTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGATA 47189 ||||||||| ||||| ||||| || ||||| || || ||||| | ||| |||||| |||| Sbjct 3532 TTCTTCAGCAGTCCAAAATGATGCTTCTGCCTTCTTGTACATTTGCCAAATATCAGGATA 3591 Query 47190 TTGGATCGGAAAAATAACAAATC 47212 | ||| || ||||| ||||||| Sbjct 3592 CTCGATGGGGAAAATTACAAATC 3614 >seq28755 Length=37593 Score = 109 bits (120), Expect = 7e-19 Identities = 300/450 (67%), Gaps = 25/450 (6%) Strand=Plus/Minus Query 94091 AGGACATATTCAACTAATAATCGGTCCCATGTTTTCTGGTAAAAGTACAGAACTAATTAG 94150 ||| || |||||| | || |||| | | || || ||||||| || ||| ||||| | Sbjct 16074 AGGTCAAATTCAAATTATTTGCGGTTCTTTCTTCTCCGGTAAAACCACCGAATTAATTCG 16015 Query 94151 AAGAGTTAGACGGTATCAGATAGCACAATAT-AAATGTATAACCATAAAATATACTAACG 94209 ||| | | ||| ||||| || ||| || || ||||| | | | || |||| |||| | Sbjct 16014 GAGAATAAAACGTTATCAAATTGCA-AAGATGAAATGCCTTATTAGAAGATATGCTAATG 15956 Query 94210 ATAATAGATATGGAACAGGAGTATGGACTCATGATAGA--AATAATTTC-----TCTGCG 94262 ||||||||||| | || | || | ||||| || || | |||| | | || Sbjct 15955 ATAATAGATATAGCTCAAATGCATTAGCACATGACGGACAAACACTTTCAGCAATTTCCG 15896 Query 94263 ATAGAAACTACTAATTTACTGACTATTGTCGACACCGTTGCCAATTTCTCAGTGATAGGT 94322 || ||| | ||||||| | || || ||| ||| |||| | || ||| Sbjct 15895 CTACAAAAT--TAATTTATT---TAATG----CAC-GTTATGAATTATGATATTATCGGT 15846 Query 94323 ATAGACGAGGGACAGTTCTTTCCAGACATAGTAGAATTTTGTGAACTTATGGCCAACAAT 94382 |||||||| | |||||| ||||||||||| ||| ||| ||| |||||||| | Sbjct 15845 ATAGACGAAGCACAGTTTTTTCCAGACATTGTAACGTTTGCAGAAGAAATGGCCAATCAA 15786 Query 94383 GGAAAAATAGTTATAGTAGCTGCATTAGATGGAACGTTTC-AACGCAAGCCCTTTACCAC 94441 ||||||||| |||| | || || ||||||| |||| || |||| || | Sbjct 15785 GGAAAAATAATTATCATTGCCTGTCTAAATGGAACATTTCGAAGAGAAGC---TTTCGGA 15729 Query 94442 CATTTCT--AATCTCATTCCGTTATCTGAAATGGTGGTGAAACTAACAGCCGTATGTATG 94499 || ||| ||||| ||||| ||| | |||| ||||| ||| || || || |||||| Sbjct 15728 AATATCTTGAATCTAATTCCATTAGCCGAAAGCGTGGTAAAATTATATGCTGTCTGTATG 15669 Query 94500 AAATGCTTTAAAGAGGCATCGTTTTCTAAA 94529 || ||| ||||||| |||||| | ||| Sbjct 15668 TCGTGTTTTCAAGAGGCTTCGTTTACAAAA 15639 >seq17242 Length=2525 Score = 104 bits (114), Expect = 3e-17 Identities = 157/221 (71%), Gaps = 7/221 (3%) Strand=Plus/Minus Query 46656 ATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAG 46715 ||| ||||| || | ||| ||| || || || || ||||| ||||| | || || || Sbjct 2214 ATCCCTACTGATAAGTTCATTACTGAAGGTAAGACCTGGCATAAGTCCTCTTTTCTTAAG 2155 Query 46716 CCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGAC 46775 ||||||||| | ||| || || ||||| ||||| || ||||| ||||| || || || | Sbjct 2154 CCAAAATATTGACGCAAAGGAACCAGAGAAGAAAATTCCTTCAACAGCAGCAAAAGCAGC 2095 Query 46776 AAGTCTCTCTCCGTAACTG--GCATCA---TTATGAATCCACCTTTGAGCCCAATCAGCC 46830 | ||| || || || || |||| | | || |||||| | ||||||| ||||| Sbjct 2094 TACTCTTTCACC--AAATGATGCATTAGTGTGATTAATCCAGTTCAAAGCCCAAACAGCC 2037 Query 46831 TTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAG 46871 || ||||| | ||| || | ||||| || ||||| || || Sbjct 2036 TTCTTCTTAATACATGGGAGAGTTTCAATGGCATTGAACAG 1996 >seq4470012 Length=581 Score = 98.7 bits (108), Expect = 1e-15 Identities = 101/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 94089 GGAGGACATATTCAACTAATAATCGGTCCCATGTTTTCTGGTAAAAGTACAGAACTAATT 94148 |||||||| || ||| | ||| |||| | |||||||||||| |||| |||||| ||||| Sbjct 117 GGAGGACAAATCCAAATTATATTCGGACTCATGTTTTCTGGAAAAACGACAGAATTAATT 176 Query 94149 AGAAGAGTTAGACGGTATCAGATAGCACAATATAAATGTATAACCATAAAATATACTAAC 94208 | || | | ||||||||| || | | | |||| || ||| |||||||| || || Sbjct 177 CGGCGATTGAAACGGTATCAAATTGTAAATCATAAGTGCCTAATTATAAAATACGCTCAC 236 Query 94209 GATAATAGATAT 94220 |||||||||||| Sbjct 237 GATAATAGATAT 248 >seq3563114 Length=337 Score = 98.7 bits (108), Expect = 1e-15 Identities = 105/136 (77%), Gaps = 2/136 (1%) Strand=Plus/Plus Query 94076 TGTCGAGATGAACGG-AGGACATATTCAACTAATAATCGGTCCCATGTTTTCTGGTAAAA 94134 |||||| ||||| || |||||| || ||| | ||| |||| ||||||||||||||||| Sbjct 32 TGTCGA-ATGAATGGGAGGACAAATCCAAATTATATTCGGAATCATGTTTTCTGGTAAAA 90 Query 94135 GTACAGAACTAATTAGAAGAGTTAGACGGTATCAGATAGCACAATATAAATGTATAACCA 94194 |||||| ||||| | || | | ||||||||| || ||| | |||||||| ||| | Sbjct 91 CGACAGAATTAATTCGGCGATTGAAACGGTATCAAATTGCAAATCATAAATGTCTAATTA 150 Query 94195 TAAAATATACTAACGA 94210 ||||||| || |||| Sbjct 151 TAAAATACGCTCACGA 166 >seq70167 Length=66857 Score = 95.1 bits (104), Expect = 2e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781 ||||| |||||||| ||||||||||| | || | ||| || || ||||| || | ||| Sbjct 30011 TGAAACTCTCCAGATAATACTCTTCGGATATAGAAATTGCTAGTGTATGGCTCAATAGAC 30070 Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841 ||||| ||||| | ||| || ||||| ||||| || ||||| || || | | ||||| Sbjct 30071 TCATTATTTCCAAGAATCTGTGCAGTCGAAGCTGTTGGCATTGGAGCTATTAGCAAACTG 30130 Query 75842 TTTCTGAGACCATGT 75856 || || | ||||||| Sbjct 30131 TTCCTTACACCATGT 30145 Score = 95.1 bits (104), Expect = 2e-14 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053 || || ||||||||||| ||||| |||||||| |||||||| ||||| || | || ||| Sbjct 64476 GTACCAGCATTAAACAAAGTAGGTGATGCATGTGTGAACCACTTTTCTGACATCAGGTTG 64535 Query 77054 TATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAAC 77113 || ||||| || |||| || ||||| | ||| || || || | || ||||| | | Sbjct 64536 TAAGTTTCTATGGCTGCATCAATATCTTCTCCATGTATACCAACTGATACTCGCATAAGC 64595 Query 77114 ATATGCTGAGGTCGTTCTACAG 77135 || || || || ||||| |||| Sbjct 64596 ATGTGTTGGGGACGTTCGACAG 64617 >seq2444859 Length=247 Score = 89.7 bits (98), Expect = 7e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 75452 TAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATATTCATCGAC 75511 || || ||||| ||||| ||||| |||| | || || || ||||| | ||||| ||| Sbjct 246 TAAAAGTGCATACTTGTGAGTTTTCCATAATTTGGTTCAGCAATATGTACATTCAGAGAC 187 Query 75512 TGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGA 75571 || |||||||| || |||| || | ||||| |||||||| | || | ||||| ||| Sbjct 186 TGGCTTTGATCAATATAAGCACCACGGTCAGCGGCCATTTTCAAAACATTTTTTTGTGGA 127 Query 75572 ATTTCCCAAATAGT 75585 |||||||| | ||| Sbjct 126 ATTTCCCATACAGT 113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 668495639304000