Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq215054 109 4e-19 seq197271 96.9 3e-15 seq21712 95.1 1e-14 seq4952844 91.5 1e-13 seq1187548 91.5 1e-13 seq990654 82.4 6e-11 >seq215054 Length=1089 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| || ||||| || || ||||| ||||| || |||||| | ||| |||||| || Sbjct 838 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACTATTACCCTTGAAGTGGAACCTAGT 779 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || | ||| | |||||| ||||| || ||||||||| ||||| |||||| Sbjct 778 GACACAATTGAAAATGTAAAAGCTAAAATCCAAGATAAAGAAGGCATTCCCCCTGATCAA 719 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || |||||||| | |||||||||||| | || ||| || | | || ||||| Sbjct 718 CAGAGGCTTATATTTGCGGGCAAACAGCTAGAGGATGGACGTACCCTCTCAGACTATAAC 659 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTG 111312 || ||||| ||||| ||||| ||| | || ||| Sbjct 658 ATCCAAAAGGAATCAACACTTCATCTGGTCTTG 626 >seq197271 Length=6114 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 111127 GGCAAAACCATTACCGTGGAAACGGAACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAA 111186 || ||||||||||| ||||| |||||||| || || | | | || || |||| Sbjct 1388 GGTAAAACCATTACTTTGGAAGTTGAACCCAGTGACACTATAGAAAACGTGAAGGCAAAA 1447 Query 111187 ATTGCCGACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAA 111246 ||| || ||||||||| |||| ||||| ||| | || |||| ||| || ||||| Sbjct 1448 ATTCAAGATAAAGAAGGCATTCCACCTGATCAGCAACGTCTCATTTTTGCAGGAAAACAG 1507 Query 111247 TTGGAAGATTCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTA 111306 ||||||||| | ||| | | ||||| ||||| || ||||||||||| || ||| | Sbjct 1508 TTGGAAGATGGCAGAACACTCTCTGATTACAATATTCAGAAAGAATCTACTCTTCATCTT 1567 Query 111307 GTGTTGCGTCTGCGCGGTGGCAA 111329 || | | ||| | || ||||| Sbjct 1568 GTCCTCAGACTGAGAGGAGGCAA 1590 >seq21712 Length=99785 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| || || |||||||| || || ||||||||||| ||||| |||||||| Sbjct 91071 ATGCAGATCTTCGTCAAAACCCCTACAGGTAAAACCATTACTTTGGAAGTTGAACCCAGT 91130 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || || ||| | || || ||||||| || ||||||||| |||| ||||| Sbjct 91131 GACACTATTGAAAACGTGAAGACAAAAATTCAAGAAAAAGAAGGCATTCCACCTGATCAG 91190 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||| | || | || ||| || || || |||||| || | | | | | ||||| ||| Sbjct 91191 CAACGTCTCAGTTTTGCTGGAAAGCAGTTGGAAAATGGCAGATCACTCTCTGATTACAAT 91250 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCAA 111329 || || |||||| |||| || ||| | || | || ||| | || ||||| Sbjct 91251 ATTCAGAAAGAAACTACTCTTCATCTTGTCCTCCGACTGAGAGGAGGCAA 91300 >seq4952844 Length=1519 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 111127 GGCAAAACCATTACCGTGGAAACGGAACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAA 111186 || ||||||||||| ||||| |||||||| || | | | | || || |||| Sbjct 23 GGTAAAACCATTACTTTGGAAGTTGAACCCAGTGACACCATCGAGAATGTGAAGGCAAAA 82 Query 111187 ATTGCCGACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAA 111246 ||| || ||||||||| |||| |||||||| | || |||| ||| || || || Sbjct 83 ATTCAAGATAAAGAAGGCATTCCACCTGATCAACAGCGTCTCATTTTTGCTGGAAAGCAG 142 Query 111247 TTGGAAGATTCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTA 111306 ||||||||| | ||| | | ||||||||||| || |||||||| ||||| ||| | Sbjct 143 TTGGAAGATGGCAGAACACTCTCAGATTATAATATTCAGAAAGAATCCACACTTCATCTT 202 Query 111307 GTGTTGCGTCTGCGCGGTGGCAA 111329 || | | ||| | || ||||| Sbjct 203 GTCCTCAGGCTGAGAGGAGGCAA 225 >seq1187548 Length=1734 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 111091 AGTTTAAAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACG 111150 || |||| |||||||| ||||| ||||| | || ||||| ||||| || | || | Sbjct 376 AGGTTAACCATGCAAATCTTTGTTAAAACACTCACTGGCAAGACCATCACACTTGAGGTG 435 Query 111151 GAACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCC 111210 ||||| || || | | | | || || ||||| || |||||||| |||| Sbjct 436 GAACCAAGTGACACAATAGAAAATGTGAAGGCTAAAATCCAGGATAAAGAAGGAATTCCA 495 Query 111211 GTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCC 111270 || ||||| ||||| |||| ||| |||||||| ||||||||| || || | Sbjct 496 CCTGACCAACAGAGGCTGATTTTTGCTGGCAAACAGTTGGAAGATGGACGCACCTTGTCT 555 Query 111271 GATTATAATATACAAAAAGAATCTACACTACATTTAGT 111308 ||||||||||| |||||||| || || | ||||| || Sbjct 556 GATTATAATATTCAAAAAGAGTCCACTTTGCATTTGGT 593 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 |||||| || ||||| || || |||| || ||||| || || | ||| |||||| || Sbjct 1515 AATGCAGATCTTTGTGAAGACACTGACTGGTAAAACAATAACTCTTGAAGTGGAACCAAG 1574 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 || | ||| | || || || ||| || ||||||||| ||||| ||||| Sbjct 1575 TGACACAATTGAAAATGTGAAGGCTAAGATTCAGGATAAAGAAGGCATTCCCCCAGATCA 1634 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 ||| || || || | ||| || ||||| ||||||||| || || | |||||||| Sbjct 1635 ACAGAGACTGATCTTTGCTGGAAAACAGTTGGAAGATGGACGCACCTTGTCTGATTATAA 1694 Query 111279 TATACAAAAAGAATCTACACTACATTTAGT 111308 ||| |||||||| || || | ||||| || Sbjct 1695 TATTCAAAAAGAGTCCACTTTGCATTTGGT 1724 >seq990654 Length=1195 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 111127 GGCAAAACCATTACCGTGGAAACGGAACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAA 111186 || ||||||||||| | ||| ||||||||| || || ||| | || || |||| Sbjct 987 GGTAAAACCATTACTCTTGAAGTGGAACCCAGTGACACTATTGAGAATGTGAAGGCAAAA 1046 Query 111187 ATTGCCGACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAA 111246 ||| || ||||||||| |||| ||||| ||| | ||||||| ||| || || || Sbjct 1047 ATTCAAGATAAAGAAGGCATTCCACCTGATCAGCAACGTCTTATTTTTGCTGGAAAGCAG 1106 Query 111247 TTGGAAGATTCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTA 111306 |||||||| | ||| | | || || ||||| || ||||| || || || ||| | Sbjct 1107 CTGGAAGATGGCAGAACACTCTCAGACTACAATATTCAGAAAGAGTCAACTCTCCATCTT 1166 Query 111307 GTGTTGCGTCTGCGCGGTGGCAA 111329 || | | ||| | || ||||| Sbjct 1167 GTCCTCAGACTGAGAGGAGGCAA 1189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396176095562200