Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq780981 111 2e-19 seq17242 111 2e-19 seq438317 107 2e-18 seq2861173 98.7 1e-15 seq326921 91.5 1e-13 seq158125 86.0 6e-12 >seq780981 Length=1727 Score = 111 bits (122), Expect = 2e-19 Identities = 112/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592 ||||||||||| || | ||||||| || || | |||||||| | ||||| ||| ||| Sbjct 146 TCATCCCTACTGATAAGTTCATTACTGAAGGTAAGACCTGGCATAAGTCCTCTTTTCTTA 87 Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652 | ||||||||||| ||||| || || || |||||||| || |||||||| ||||| || Sbjct 86 AGCCAAAATATTGATGCAAAGGAACCAGAGAAGAAAATTCCTTCAACAGCAGCAAAAGCA 27 Query 23653 ACAAGACGTGTACCAAATGTTGCATT 23678 | | | | |||||||| |||||| Sbjct 26 GCTACTCTTTCACCAAATGATGCATT 1 >seq17242 Length=2525 Score = 111 bits (122), Expect = 2e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 23535 ATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAAT 23594 ||||||||| || | ||||||| || || | |||||||| | ||||| ||| |||| Sbjct 2214 ATCCCTACTGATAAGTTCATTACTGAAGGTAAGACCTGGCATAAGTCCTCTTTTCTTAAG 2155 Query 23595 CCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCAC 23654 ||||||||||| ||||| || || || |||||||| || |||||||| ||||| || | Sbjct 2154 CCAAAATATTGACGCAAAGGAACCAGAGAAGAAAATTCCTTCAACAGCAGCAAAAGCAGC 2095 Query 23655 AAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTT 23714 | | | |||||||| ||||||| | | |||||| || | |||| |||||| Sbjct 2094 TACTCTTTCACCAAATGATGCATTAGTGTGATTAATCCAGTTCAAAGCCCAAACAGCCTT 2035 Query 23715 CAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAG 23753 | || | ||| | |||||||| || || || || Sbjct 2034 CTTCTTAATACATGGGAGAGTTTCAATGGCATTGAACAG 1996 >seq438317 Length=14545 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23898 ATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATG 23957 |||||| |||||||||||||||||||||||||| || || || | || || ||||| Sbjct 3418 ATTTTCATTAACAATACCATCACTAGCAGCAAAAAAGGCTAGGATATGCGAAATGAAATG 3477 Query 23958 TCTTTCATCAGTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATC 24017 ||||| || | |||||| ||| ||| | ||||||||| | ||| ||||| || Sbjct 3478 CCTTTCTGTAGATTTTAATTTCCCCCAGTCAGCTAAATCTTTTGAGAGATCCACTTCTTC 3537 Query 24018 AACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCATTATGTTGTAT 24077 | | |||||||| ||| || ||| |||||| ||||||||||| || | || Sbjct 3538 AGCAGTCCAAAATGATGCTTCTGCCTTCTTGTACATTTGCCAAATATCAGGATACTCGAT 3597 Query 24078 TGGAAATATTACGAATC 24094 || || ||||| |||| Sbjct 3598 GGGGAAAATTACAAATC 3614 Score = 82.4 bits (90), Expect = 7e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 23782 TATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAAC 23841 ||||| |||||||| | ||| ||||||||||| || | ||||||||| ||||||||||| Sbjct 894 TATGTGTCAATTAGCAGACTGTACATTTCAGAGTGGACATTTTCAATTGCAATCTGAAAT 953 Query 23842 CCATAAAAACATCTAGCTTC 23861 ||||| || || | ||||| Sbjct 954 CCATAGAAGCAGCGGGCTTC 973 >seq2861173 Length=269 Score = 98.7 bits (108), Expect = 1e-15 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 64439 ATTGATGAAGGGCAATTTTTTACTGATATAGTTGAATTTTCTGAAAATATGGCCAATAAA 64498 || ||||||| || |||||| | || || || ||| ||||| | ||||||||| || Sbjct 268 ATAGATGAAGCACAGTTTTTTCCAGACATCGTGACGTTTGCTGAAGAAATGGCCAATCAA 209 Query 64499 GGAAAAATTGTAATTGTTTCAGCGTTAGATGCGACATATAAAAGAGAACCATTTGGTAAT 64558 ||||||||| | ||| || | || | | || | | |||| || | || || ||| Sbjct 208 GGAAAAATTATTATTATTGCCTGTCTAAACGGAACTTTTCGAAGAAAAGCTTTCGGAAAT 149 Query 64559 ATCCTAAATCTAGTTCCATTAGCTGAAAAAGTAATAAAATTAAATGCTATATGTAAAATA 64618 || || || || |||| ||||| ||||| || |||||||| ||||| | |||| Sbjct 148 ATTTTACATTTAATTCCGTTAGCCGAAAACGTGGTAAAATTACATGCTGTTTGTATGTCG 89 Query 64619 TGTTTCAAAGATGCTGCATTTACTAAA 64645 ||||| |||| ||| ||||||| ||| Sbjct 88 TGTTTTCAAGAAGCTTCATTTACAAAA 62 >seq326921 Length=5948 Score = 91.5 bits (100), Expect = 1e-13 Identities = 181/264 (69%), Gaps = 22/264 (8%) Strand=Plus/Minus Query 23770 TTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATA 23829 |||||| |||||||||||| | || | ||| ||||| || |||||||||||||| ||| Sbjct 5116 TTATCTCGAATATATGTATCATTAAGAAGACTGTACATCTCTGAATGAATATTTTCTATA 5057 Query 23830 GCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTT 23889 ||| | | |||| || | | |||||| | ||| || | | || |||| | Sbjct 5056 GCATTTTAAAACGCA-------CTGT-GCTTCAAGAATTTGTACTTTGTGAATGAATCGT 5005 Query 23890 TTAGCTAAA-TTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTT 23948 | ||||| ||||| | || || ||||||||||| ||||| || | | || ||||| Sbjct 5004 TCTACTAAATTTTTCACTCACTATTCCATCACTAGCTGCAAAAAATGTTAAAATGTATTT 4945 Query 23949 TATAAAATGTCTTTCATCAGTTGA---TAATTTTTTCCAATCATTAATATCTTTTGATAA 24005 || |||| |||| |||| ||| || |||| || | || |||| || Sbjct 4944 AATGAAATACTGTTCA----TTGACCGTAAGTTGTTCC---CAATGAT---TTTTCCCAA 4895 Query 24006 ATCAACTTCATCAACTGTCCAAAA 24029 ||||||||| || || |||||||| Sbjct 4894 ATCAACTTCTTCTACAGTCCAAAA 4871 >seq158125 Length=12555 Score = 86.0 bits (94), Expect = 6e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 64445 GAAGGGCAATTTTTTACTGATATAGTTGAATTTTCTGAAAATATGGCCAATAAAGGAAAA 64504 |||| |||||||||| ||| |||| ||| | ||||| ||||| ||| ||||||| Sbjct 2033 GAAGCGCAATTTTTTGTAGATGTAGTACCGTTTGCAGAAAAAATGGCAAATCGAGGAAAA 1974 Query 64505 ATTGTAATTGTTTCAGCGTTAGATGCGACATATAAAAGAGAACCATTTGGTAATATCCTA 64564 | | || ||| | || | |||| || | | ||||||| | ||||||||||| | Sbjct 1973 ACGTTTATCGTTGCTGCTCTTGATGGAACTTTTCGAAGAGAAGCGTTTGGTAATATTTTG 1914 Query 64565 AATCTAGTTCCATTAGCTGAAAAAGTAATAAAATTAA 64601 | || || |||||||| |||| || |||||||||| Sbjct 1913 CACCTGGTGCCATTAGCAGAAAGCGTTATAAAATTAA 1877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488982512205000