Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq2837514 95.1 8e-15 seq4730498 86.0 4e-12 seq3343411 84.2 1e-11 seq3032665 84.2 1e-11 >seq2837514 Length=268 Score = 95.1 bits (104), Expect = 8e-15 Identities = 137/192 (71%), Gaps = 1/192 (1%) Strand=Plus/Plus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGC-AAA 44205 ||||| ||||||||||| || | ||| || | || ||||| || ||||| || ||| Sbjct 11 TCCTTCTGGATGTTGTAGTCAGAAAGTGTTCGGCCATCTTCCAGTTGTTTCCCTGCAAAA 70 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 |||| ||| |||||||| | ||| | |||||||| || ||||| ||| | | Sbjct 71 AATCAGACGTTGCTGATCAGGAGGGATGCCTTCCTTATCTTGGATCTTAGCCTTGACATT 130 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | | |||||||| | ||||| |||| || || ||||| || || |||||||| || Sbjct 131 TTCAATGGTGTCACTAGTCTCCACTTCCAGGGTTATTGTCTTGCCAGTCAGGGTCTTTAC 190 Query 44326 GAAGATTTGCAT 44337 || |||||||| Sbjct 191 AAATATTTGCAT 202 >seq4730498 Length=794 Score = 86.0 bits (94), Expect = 4e-12 Identities = 138/196 (70%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| || |||||||| || | ||| ||| | || || | ||||| || | ||| Sbjct 484 CTCCTTCTGAATGTTGTAGTCAGAAAGTGTGCGACCATCTTCGAATTGCTTTCCAGAAAA 543 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGC-TTCAATG 44264 ||||| ||||||||||| | | | | ||||| || ||| | | || ||| |||| Sbjct 544 AATCAAGCGCTGCTGATCAGGAAGAATGCCTTCTTTGTCC-TGAATTTTTGCTTTCACGT 602 Query 44265 TTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 |||| | || || | | ||| ||||| | || || || || || |||||||| |||| Sbjct 603 TTCCATTTGTATCAGAAGGTTCAACCTCTAGGGTGATGGTTTTCCCTGTGAGGGTTTTCA 662 Query 44325 CGAAGATTTGCATGAT 44340 | || || |||||||| Sbjct 663 CAAAAATCTGCATGAT 678 >seq3343411 Length=310 Score = 84.2 bits (92), Expect = 1e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 44123 CTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCG 44182 ||||| ||||| ||||| || |||||||||||||| || || | ||| ||| | Sbjct 104 CTCAAGACCAGATGAAGTGTTGATTCCTTTTGGATGTTATAGTCTGAGAGGGTGCGTCCA 163 Query 44183 TCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTT 44242 || || ||||| || || ||||| || | | ||||||||||| || | ||||| || Sbjct 164 TCCTCTAGCTGTTTGCCTGCAAATATAAGCCTCTGCTGATCTGGGGGAATGCCTTCTTTA 223 Query 44243 TCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATC 44302 || || || || | || |||| ||||| | |||||| || | ||||| Sbjct 224 TCTTGGATTTTAGCTTTTACATTTTCTATCGTGTCACTAGGTTCCACTTCAAGGGTAATG 283 Query 44303 GTCTTTCCCGTGAGGGTCTTCACGAA 44328 ||||| || || || |||||||| || Sbjct 284 GTCTTACCAGTTAGAGTCTTCACAAA 309 >seq3032665 Length=281 Score = 84.2 bits (92), Expect = 1e-11 Identities = 113/156 (72%), Gaps = 1/156 (1%) Strand=Plus/Plus Query 44183 TCGTCCAGCTGCTTCCCGGCAAAGA-TCAAACGCTGCTGATCTGAAGGCACACCTTCCTT 44241 || || ||||||||||| ||||| | ||| | ||||||||||| || | |||| | || Sbjct 124 TCTTCAAGCTGCTTCCCTGCAAAAAATCAGTCTCTGCTGATCTGGTGGTATACCTCCTTT 183 Query 44242 TTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAAT 44301 ||| ||| || ||||| || | ||||| ||| || || || || | ||||| Sbjct 184 ATCCTGTATTTTGGCCTTCACATTTTCAATGGTATCGCTGGGCTCAACATCTAATGTAAT 243 Query 44302 CGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| || || || |||||||||||||| || || Sbjct 244 TGTCTTGCCAGTCAGTGTCTTCACGAAGATCTGTAT 279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338112385616775