Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq215054 93.3 4e-14 seq3343411 89.7 4e-13 seq4730498 86.0 5e-12 seq2535487 86.0 5e-12 seq2316783 86.0 5e-12 >seq215054 Length=1089 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 || |||||||| || || ||||| || ||||||||||| |||||||| || | || Sbjct 627 AAGACCAGATGAAGTGTTGATTCCTTTTGGATGTTATAGTCTGAGAGGGTACGTCCATCC 686 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || ||||| ||||| || ||||| || | |||||| || | ||||| || || ||| | Sbjct 687 TCTAGCTGTTTGCCCGCAAATATAAGCCTCTGTTGATCAGGGGGAATGC-CTTCTTTATC 745 Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 || |||| |||| || | | ||||| || | ||||| || | || || || Sbjct 746 TTGGATTTTAGCTTTTACATTTTCAATTGTGTCACTAGGTTCCACTTCAAGGGTAATAGT 805 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || |||| ||||| || || |||||||| Sbjct 806 CTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 838 >seq3343411 Length=310 Score = 89.7 bits (98), Expect = 4e-13 Identities = 154/221 (70%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || |||| | || |||||||| || || ||||| || ||||||||||| || Sbjct 91 GCCACCACGTAACCTCAAGACCAGATGAAGTGTTGATTCCTTTTGGATGTTATAGTCTGA 150 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||||||| | || || ||||| ||||| || ||||| || | ||| || || | ||| Sbjct 151 GAGGGTGCGTCCATCCTCTAGCTGTTTGCCTGCAAATATAAGCCTCTGCTGATCTGGGGG 210 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || || || ||| | || |||| |||| || | | ||||| || | |||| Sbjct 211 AATGC-CTTCTTTATCTTGGATTTTAGCTTTTACATTTTCTATCGTGTCACTAGGTTCCA 269 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAA 41854 | || | || || || ||||| || || ||||| || ||| Sbjct 270 CTTCAAGGGTAATGGTCTTACCAGTTAGAGTCTTCACAAAA 310 >seq4730498 Length=794 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||||||||| ||||| || || ||||| | || |||| ||||| || | || Sbjct 484 CTCCTTCTGAATGTTGTAGTCAGAAAGTGTGCGACCATCTTCGAATTGCTTTCCAGAAAA 543 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 |||| |||||| || || | ||| || || |||||| ||| ||||||||| ||| Sbjct 544 AATCAAGCGCTGCTGATCAGGAAGAATGCCTTCTTTGTCC-TGAATTTTTGCTTTCACGT 602 Query 41791 CGACA-CAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 || || || | || ||||| | || || ||||| || || || || || | Sbjct 603 TTCCATTTGTATCAGAAGGTTCAACCTCTAGGGTGATGGTTTTCCCTGTGAGGGTTTTCA 662 Query 41850 CGAAAATCTGCATG 41863 | |||||||||||| Sbjct 663 CAAAAATCTGCATG 676 >seq2535487 Length=251 Score = 86.0 bits (94), Expect = 5e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || |||| | || |||||||||||||| |||||| || ||||||||||| || Sbjct 130 GCCACCACGTAACCTCAAGACCAGATGCAGCGTCGACTCCTTTTGGATGTTATAGTCTGA 71 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||| ||||| | || || ||||| ||||| || ||||| || | ||| || || | || Sbjct 70 GAGAGTGCGGCCATCCTCTAGCTGTTTGCCTGCAAATATAAGCCTCTGCTGATCTGGAGG 11 Query 41755 AACGC 41759 || || Sbjct 10 AATGC 6 >seq2316783 Length=240 Score = 86.0 bits (94), Expect = 5e-12 Identities = 109/149 (73%), Gaps = 1/149 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||| |||||||| || ||||| ||||||||||| || || Sbjct 160 CCACCACGGAGACGCAGCACAAGATGCAGAGTTGATTCCTTTTGAATGTTATAATCTGAC 101 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| || |||||||| || || || || || ||||| ||||| | ||| Sbjct 100 AGCGTGCGACCGTCTTCAAGCTGCTTTCCAGCAAAAATAAGACGCTGCTGGTCAGGAGGA 41 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT 41784 | | ||||| | | ||| | || |||| Sbjct 40 ATACCTTCCTTAT-CTTGAATCTTAGCTT 13 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434210996403825