Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_001416.1 Length=48502 Score E Sequences producing significant alignments: (Bits) Value seq55013 187 8e-43 >seq55013 Length=475 Score = 187 bits (206), Expect = 8e-43 Identities = 282/407 (69%), Gaps = 33/407 (8%) Strand=Plus/Minus Query 32263 GCAGTATTTTCGACAATGCGCTCGGCTTCATCCTTGTCATAGATACCAGCAAATCCGAAG 32322 |||||| ||| | || ||||| ||||| || |||||| || || ||||| || || Sbjct 418 GCAGTACCTTCTATGATTCGCTCAGCTTCGTCTGGGTCATAAATCCCCGCAAACCCAAAT 359 Query 32323 GCCAGACGGGCACACTGAATCATGGCTTTATGACGTAACATCCGTTTGGGATGCGACTGC 32382 |||| |||||||| ||||||||||||||||| |||||||| || || ||||| ||| Sbjct 358 GCCAAGCGGGCACATTGAATCATGGCTTTATGGCGTAACATGCGCTTTGGATGACTGTGC 299 Query 32383 CACGGCCCCGTGATTTCTCTGCCTTCGCGAGTTTTGAATGGTTCGCGGCGGCATTCATCC 32442 || || || || || ||| || ||||| | Sbjct 298 CATGGGCCTGTA---------------------------GG---GCGTCGACATTCCGTC 269 Query 32443 ATCCATTCGGTAACGCAGATCGGATGATTACGGTCCTTGCGGTAAATCCGGCATGTACAG 32502 || |||| || || | | ||||||| ||||| || ||||| || ||||| || ||| Sbjct 268 ATGAATTCAGTGACTTCGGTAGGATGATGGCGGTCTTTTCGGTAGATACGGCAGGTGCAG 209 Query 32503 GATTCATTGTCCTGCTCAAAGTCCATGCCATCAAACTGCTGGTTTTCATTGATGATGCGG 32562 | | || ||| |||| ||| |||||||||||| || | |||||| || |||||||| Sbjct 208 GCCTGATCGTCTTGCTGAAACGTCATGCCATCAAAGTGTTCGTTTTCGTTAATGATGCGT 149 Query 32563 GACCAGCCATCAACGCCCACCACCGGAACGATGCCATTCTGCTTATCAGGAAAGGCGTAA 32622 ||||| ||||||| ||| || ||||| |||||| || ||||| ||||| |||||| Sbjct 148 GACCAACCATCAATGCCAACGACCGGCACGATG---TTACCTTTATCGGGAAAAGCGTAA 92 Query 32623 ATTTCTTTCGTCCACGGATTAAGGCCGTACTGGTTGGCAACGATCAG 32669 ||||| || || | ||||| ||||| || || ||||||| || || Sbjct 91 ATTTCCTTGGTAAAGGGATTGAGGCCATATTGACTGGCAACAATTAG 45 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154981033244960