Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq38498 136 7e-27 >seq38498 Length=6817 Score = 136 bits (150), Expect = 7e-27 Identities = 308/455 (68%), Gaps = 6/455 (1%) Strand=Plus/Minus Query 189284 GTAAGAAGAGAACTATCGGATAATTTTTGTTACTATAACAAACATTATGATAGTATCCAG 189343 || || |||||| || ||||||||| ||||| ||||| || ||||||||| | | || Sbjct 5725 GTTAGGAGAGAATTAGCGGATAATTACTGTTATTATAATGAAAATTATGATAATCTTAAG 5666 Query 189344 TCTACTCATTCATGGGCCAGAAAAACATTAGAAGA-TCACATTAATGATCCTAGAAAGTA 189402 || | ||||| | || ||| | ||| | |||| || || | | || Sbjct 5665 GGCGCTTACGATTGGGCGCGGAATACACT-GAACACTCACCGGAAAGACAAACGCGAATA 5607 Query 189403 TATATATTCCATTAAACAACTCGAAAAAGCGGAAACTCATGATCCTCTATGGAACGCGTC 189462 | | ||||| || | | | || | || || ||||| || | | |||||| | | Sbjct 5606 TCTCTATTCTTTTGAGAAGTTAGAGAGGGCTGAGACTCACGACCAGTTGTGGAACTCCGC 5547 Query 189463 ACAAATGCAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTATTGGGCTAA 189522 || | || ||| ||||| || ||||||||| | ||| | |||||||||||||| || Sbjct 5546 TCAGAGACAAATGACAAGAGATGGCAAAATGCATGGCTTTATGCGAATGTATTGGGCAAA 5487 Query 189523 GAAGATACTTGAATGGACTAGAACACCTGAAGACGC-TTTGAGTTATAGTATCTATTTGA 189581 ||||||||| || ||||| |||||| ||| | || | || || ||| ||||| Sbjct 5486 GAAGATACTCGAGTGGACACAAACACCAGAACAGGCGCTCGAATT-CGCTATTCTTTTGA 5428 Query 189582 ACAACAAGTACGAACTAGACGGCACG-GATCCTAACGGATACGTAGGTTGTATGTGGTCT 189640 || | ||||||||| | ||||| ||| || || ||||| || || || |||||||||||| Sbjct 5427 ACGATAAGTACGAATTGGACGG-ACGCGACCCCAACGGGTATGTCGGCTGTATGTGGTCT 5369 Query 189641 ATTTGCGGATTACACGATAGAGCGTGGAAAGAAAGACCGATATTTGGAAAGATAAGATAT 189700 || || || | |||||| | ||| ||||| ||| | || || || || | || Sbjct 5368 ATATGTGGTATTCACGATCAGGGATGGGCTGAAAGGCCGGTGTTCGGCAAAATTCGTTAC 5309 Query 189701 ATGAATTATGAGAGTTCTAAGAAGAAATTTGATGT 189735 ||||| || || | | | || || |||||||| Sbjct 5308 ATGAACTACAAGGGATGTGAGCGCAAGTTTGATGT 5274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 922546580953800