Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq17432 120 2e-22 seq214 104 2e-17 seq669 102 6e-17 >seq17432 Length=31749 Score = 120 bits (132), Expect = 2e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 |||||| | || | ||||||| ||||| ||||| || |||||||||||||| |||| Sbjct 23973 TCCTCCTCTCAGACGGAGTACCAAATGAAGGGTTGACTCCTTTTGAATGTTGTAATCGGA 23914 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 | || | ||||| | ||||||||||||| |||| ||||| ||||| || || Sbjct 23913 GAGAGTGCGGCCGTCTTCTAGTTGTTTGCCCGCAAAGATCAGTCTCTGTTGGTCGGGAGG 23854 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | ||| || || || ||| | ||| || | ||| ||||| |||||| Sbjct 23853 GATGCCCTCTTTGTCCTGAATCTTGGCCTTCACGTTCTCAATGGTGTCGGAGGGCTCCAC 23794 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 |||| ||| ||| |||| |||||||| ||||| || |||||||||||||| Sbjct 23793 CTCAAGGGTAATGGTTTTTCCGGTCAACGTTTTCACGAAAATTTGCATTTT 23743 Score = 105 bits (116), Expect = 5e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 ||||||| ||||| || || || ||||||||||| || |||| | || | ||| Sbjct 24577 AGTACCAAATGAAGGGTCGACTCCTTTTGAATGTTATAATCGGAAAGAGTGCGCCCGTCT 24518 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 ||||| |||||||| || |||| ||||||||||| || || | |||||| ||||| Sbjct 24517 TCCAACTGTTTGCCGGCGAAGATCAGTCTTTGTTGGTCGGGAGGGATGCCTTCTTTATCT 24458 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 |||| ||| || | ||| ||||| |||||| |||| ||| ||| || Sbjct 24457 TGGATTTTGGCCTTAACGTTCTCAATGGTGTCGGAGGGCTCCACCTCAAGGGTTATGGTT 24398 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 || ||||||| || || ||||| ||||||||| Sbjct 24397 TTTCCGGTCAGAGTCTTAACAAAGATTTGCATT 24365 Score = 98.7 bits (108), Expect = 8e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 |||||| | || | ||||||| ||||| || || || |||||||| || ||||| | Sbjct 24821 TCCTCCTCTCAGACGGAGTACCAAATGAAGAGTCGACTCCTTTTGAATATTATAGTCAGA 24762 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 | |||| | ||||| | ||||||||| || ||||||| | ||||||||| || Sbjct 24761 GAGTGTTCGGCCGTCTTCTAGTTGTTTGCCGGCGAAGATAAGACGCTGTTGATCCGGAGG 24702 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | || || || || ||||| ||| || | ||| ||||| ||||| Sbjct 24701 AATACCCTCTTTGTCCTGAATTTTCGCCTTCACGTTCTCAATGGTGTCCGACGGCTCCAC 24642 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 ||| | |||||| | || |||||||||||||| || || ||||||||| Sbjct 24641 TTCCAAAGTGATGGTCTTTCCGGTCAATGTTTTGACGAATATTTGCATT 24593 Score = 95.1 bits (104), Expect = 9e-15 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 18097 ATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGG 18156 ||||||| | |||| ||| |||| ||||| || || || |||||||| |||||||||| Sbjct 25050 ATCCTCCTCTGAGTCGAAGCACCAAATGAAGGGTCGACTCCTTTTGAATATTGTAGTCGG 24991 Query 18157 CCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGG 18216 | || | ||||||| ||||||||| || |||| | || ||| |||||| | Sbjct 24990 AAAGAGTGCGCCCGTCTTCCAGTTGTTTGCCAGCGAAGATCAATCGTTGCTGATCCGGAG 24931 Query 18217 GCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276 | | ||||| || || ||| | ||| || | | | ||||| ||||| Sbjct 24930 GAATCCCTTCTTTGTCTTGAATCTTAGCCTTTACATTCTCGATGGTGTCCGACGGCTCCA 24871 Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 ||| | |||||| | || ||||||||||| || || || ||||||||| Sbjct 24870 CTTCCAAAGTGATGGTCTTTCCGGTCAATGTCTTCACGAATATTTGCATT 24821 >seq214 Length=17119 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||| | ||||| || |||| ||||| || || || ||||| |||||||| ||| Sbjct 956 CCTCCTCTCAGTCTCAGCACCAAATGAAGGGTCGACTCCTTTTGGATGTTGTAATCGCTA 1015 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | ||| | | ||||| ||||||||||| ||| |||| | | || |||||| || Sbjct 1016 AGAGTTCTGCCGTCTTCTAATTGTTTGCCAGCAAAGATCAACCGCTGCTGATCCGGAGGT 1075 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||| ||||| || ||| | | ||| || | ||| ||| || | |||||| Sbjct 1076 ATGCCCTCCTTGTCCTGAATCTTTGCCTTTACATTCTCAATAGTATCGCTGGGCTCCACC 1135 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 |||| |||||| | || || ||||| || || || || ||||||||||| Sbjct 1136 TCAAGAGTGATGGTCTTACCCGTCAACGTCTTGACGAAGATTTGCATTTT 1185 >seq669 Length=42814 Score = 102 bits (112), Expect = 6e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 18123 TGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGT 18182 ||||| ||||| || || ||||||||||| || | | || | ||||| || ||| Sbjct 32321 TGAAGGGTTGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGTCCGTCTTCTAACTGT 32380 Query 18183 TTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGT 18242 ||||||||| | || | ||| || |||||| || | |||||| || || ||| | | Sbjct 32381 TTGCCCGCAAATATCAATCTCTGCTGATCCGGAGGAATGCCTTCTTTGTCCTGAATCTTT 32440 Query 18243 TGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTC 18302 ||| || | | | | ||||||| ||||||| |||| ||||| | || ||||| Sbjct 32441 GCCTTTACATTTTCGATAGTGTCAGAGGGCTCGACCTCAAGAGTGATAGTCTTTCCGGTG 32500 Query 18303 AATGTTTTTACAAAAATTTGCATTTT 18328 | ||||| ||||| ||||||||||| Sbjct 32501 AGGGTTTTCACAAATATTTGCATTTT 32526 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 18123 TGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGT 18182 ||||| ||||| |||||||| |||||||| || | | || | || || || ||| Sbjct 31867 TGAAGGGTTGACTCTTTTTGGATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCTAACTGT 31926 Query 18183 TTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGT 18242 ||||||||| |||||||||| ||||||||| || | ||||||||| || ||| | | Sbjct 31927 TTGCCCGCAAAGATAAGTCTCTGTTGATCCGGAGGAATGCCTTCCTTGTCCTGAATCTTT 31986 Query 18243 TGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTC 18302 ||| || | | | | || || || ||| ||| | || || | || ||||| Sbjct 31987 GCCTTAACGTTTTCGATGGTATCGGAGGCCTCCACTTCCAAAGTAATTGTCTTTCCGGTG 32046 Query 18303 AATGTTTTTACAAAAATTTGCATT 18326 | ||||| || || ||||||||| Sbjct 32047 AGGGTTTTCACGAATATTTGCATT 32070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379083502697025