Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_003309.1 Length=53373 Score E Sequences producing significant alignments: (Bits) Value seq55467 266 1e-66 >seq55467 Length=2484 Score = 266 bits (294), Expect = 1e-66 Identities = 757/1149 (66%), Gaps = 22/1149 (2%) Strand=Plus/Plus Query 1067 AGGTGAATGCCTCGAATATGAACAAGCCGGCCGACGGCAGCCGATTTGAGCCGATCATCG 1126 |||| |||||||| || || ||| || ||| || ||| || ||||| | || | Sbjct 1 AGGTTAATGCCTCCAACATAAACCGTCCCATCGATGGGGCCCGTTTCGAGCCACTAATTG 60 Query 1127 GCAACCCAGGCGACGGCGCGTCGCCGTCGTGT-GCGATCGTGGACGAGTATCACGAGCAC 1185 ||||||| ||||| || || || || || | | || || | || || | || || ||| Sbjct 61 GCAACCCCGGCGATGGGGCTTCTCC-TCATCTTGCCATTATCGATGAATTCCATGAACAC 119 Query 1186 GACAGCGCCGCGCTGTACGAAACAATGCTGACTGGCATGGGCGCGCGTCGACAGCCGCTC 1245 || | | || || | |||||| |||| || |||||||| || | || ||||| Sbjct 120 GAAAATAGCAATCTTTATCACACAATGTTGACCGGTATGGGCGCCCGGCAGCAACCGCTT 179 Query 1246 ATGTTCATCATCACGACTGCGGGCGCGAACATCGAGGGGCCGTGCTTCGACAAGCGCCGG 1305 || | | | ||||| || || ||||||| || || || | |||||||||||| Sbjct 180 ATCTGGAGTGTGACGACAGCCGGTAATGACATCGAAGGTCCCTGTTATGACAAGCGCCGG 239 Query 1306 CAGGTGATCGAAATGCT--CGAAGGGACGGTGCCAGACGACGAGCTTTTCGGCTGGATCT 1363 | || || || ||||| | ||| | ||||| ||||||| | || || | || | Sbjct 240 GAAGTCATTGATATGCTAACCCAGGTA--GTGCCCAACGACGAATTATTTGGGTTAATTT 297 Query 1364 GGACGATCGACGAAGGGGACGATTGGACCGATCCGCGCGTGCTGGCGAAAGCCAATCCGA 1423 || |||| || || || ||||||||| | || || || ||||||||||| | Sbjct 298 ACACCCTCGATGAGGGAGAGGATTGGACCCAGCCAGCCGCCCTCAGCAAAGCCAATCCCA 357 Query 1424 ATATCGGAATCTCGGTCTATCAGGACTATCTGGAAAGCCAGCAGCAGCGTGCGATTAAGT 1483 | || || |||| | || | || | |||| |||||| || || || || || || Sbjct 358 ACATGGGCGTCTCTATTTACCCTGATTTTCTGCTAAGCCAACAACAACGAGCCATCAACA 417 Query 1484 CTGCGCGCTTCACGAACACGTTCAAGACGAAGCACTTGAACGTCTGGACGTCGGCCAAGG 1543 ||| | | ||| | || || || || ||| | || ||||| ||| | || | Sbjct 418 ATGCCAGACAAGCCAACGCCTTTAAAACCAAACACCTCAATATCTGGGTGTCAG-CACGT 476 Query 1544 CGGGCTAT-TTCAACCTCGAAGACTGGAAATCATGCGAAGAC-CGATCGCTGACCCTTGA 1601 |||| | |||||| | | ||||| | || |||||| | | | ||||| | || Sbjct 477 TCGGCTTTCTTCAACATGGTGAACTGGCGCGCTTGTGAAGACACCAGC-CTGACTTTGGA 535 Query 1602 GCAGTTCGAGGGGCAAGATTGCGTGCTCGCGCTCGACATGGCGCGCAAGCTCGATTTGAA 1661 || ||||| || |||| || | | | | || ||||||||||||| ||| |||| Sbjct 536 TCAATTCGAAGGACAAGCCTGTTATTTAGGGTTTGATTTGGCGCGCAAGCTAGATATGAA 595 Query 1662 CAGTATGGCCCGGCTTTTCTGGCACGACATCGACGGGCGGCGGCATTACTTCTGCGTTGC 1721 || |||||||| | || | || || |||| || ||||| | | | |||| Sbjct 596 TAGCATGGCCCGCGTGTTTATCCGTGAGATTAACGGAAAACGTCATTATTACAGTATTGC 655 Query 1722 GCCGCGGTTCTGGGTGCCCGAAGACACCGTGCGCA------ATACCGAAAACCGTCGTAT 1775 || ||||||||||||| | |||| |||| || ||||| | | ||||| | Sbjct 656 CCCTAGGTTCTGGGTGCCTTACGACAGCGTGTACAGTGCAGATACCAACGATCGTCGCAC 715 Query 1776 GGCGGAGCGATATCAGGCGTGGGTCAATCAGGGCTGTTTGCTCGAAACGGATGGCGCGGA 1835 ||||| |||| ||| |||||||||| | | | ||| || || || || || Sbjct 716 AGCGGAACGATTTCAAAAGTGGGTCAATATGCACCAGCTAATCGCGACCGACGGGGCAGA 775 Query 1836 GATCGACTATCGCGACATTCTCGAGGAGGCGAAGGATGCGAACCGGTTGTGTCCGGTGCA 1895 | ||||| || | || ||||| || || |||| || ||| | | ||||| Sbjct 776 AGTTGACTACCGGTATATCCTCGAAGAAGCAAAGGCCGCTAACTGTCTTAACCCGGT--C 833 Query 1896 ATGCACTC--CGCTCGACCCGCACGGCGCAACGAACCTGTCGCACCAGCTTGCGGACGAA 1953 |||| || || |||| || || ||||| || |||| || ||| | || ||||| Sbjct 834 GTGCAATCAGCGATCGATCCTCATGGCGCCACTGGCCTGAGTCATCAGTTGGCCGACGAG 893 Query 1954 GGGTTGACGCCAGTCACCATCGTGCAGAACTACACGAACATGTCGGACCCAATGAAGGAG 2013 | | || |||||||| | || || |||||| | ||||| || | ||||| || Sbjct 894 CAACTTAACCCTGTCACCATTATCCAAAATTACACGCATATGTCAGATGCCATGAAAGAA 953 Query 2014 CTTGAAGCGGCGATTACGTCGGGCCGGTTCCATCACGACGGAAACCCGATCATGACATGG 2073 | ||||| || ||| || ||||| || || ||||| || |||| |||||||| ||| Sbjct 954 TTGGAAGCCGCCATTGAATCTGGCCGCTTTCACCACGATGGTCACCCCATCATGACCTGG 1013 Query 2074 TGCGTTAGCAACGTCATCGGCAAGAACTTGCCGGGCAATGACGACGTGGTGCGCCCGAT- 2132 ||| | |||||||| | || || | ||||||| || || ||| | || |||||||| Sbjct 1014 TGCATCAGCAACGTGGTGGGTAAACATGTGCCGGGTAACGATGACATTGTTCGCCCGATA 1073 Query 2133 CAAGCAGGGTAACGACAACAAAATCGACGGCGCTGTTGCGCTCATCATGGCGGTGGGGCG 2192 ||| | | || || |||||||| |||||||| || || | |||||||| || || || Sbjct 1074 AAAGAACAGGAA-GAAAACAAAATTGACGGCGCCGTCGCATTAATCATGGCAGTTGGTCG 1132 Query 2193 TGCAATGCT 2201 |||||||| Sbjct 1133 GGCAATGCT 1141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 170557803898150