Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_003315.1 Length=31508 Score E Sequences producing significant alignments: (Bits) Value seq40599 105 1e-18 seq6749 82.4 2e-11 >seq40599 Length=28396 Score = 105 bits (116), Expect = 1e-18 Identities = 69/76 (91%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 358 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 417 || ||||||||| ||||||||||||| ||||||| ||||||||||| ||||||||||| Sbjct 22236 TGATGGGTCGTGCAGGATTCGAACCTGCGACCAATTGATTAAAAGTCAACTGCTCTACCG 22295 Query 418 ACTGAGCTAACGACCC 433 |||||||||||||||| Sbjct 22296 ACTGAGCTAACGACCC 22311 >seq6749 Length=158988 Score = 82.4 bits (90), Expect = 2e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 358 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 417 |||||||||||| ||| |||||||| ||||| | |||||| |||| |||||||||| Sbjct 14671 TGGTGGGTCGTGCAGGGCTCGAACCTGCGACCTATTGATTAAGAGTCAACTGCTCTACCC 14730 Query 418 ACTGAGCTAACGACCCAA 435 ||||||||||| ||||| Sbjct 14731 GCTGAGCTAACGGCCCAA 14748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 100636619268300