Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq11840 215 5e-51 >seq11840 Length=1854 Score = 215 bits (238), Expect = 5e-51 Identities = 342/485 (71%), Gaps = 4/485 (1%) Strand=Plus/Plus Query 37138 ACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATG 37197 |||||||| ||||| || | |||| | | ||||||||| ||||| || || || || Sbjct 726 ACCTGAAACTCTCCGGAGAGGACTCGACGGGAATATATATTACTAGTGTAGGGCTCTATC 785 Query 37198 GACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGG 37257 |||||||| || | |||||| || | ||||| || || ||||| || || | ||| Sbjct 786 GACTCATTGTTGCCTAATATCTGTGCCGTAGAAGCGGTCGGCATCGGAGCCAACGTAAGA 845 Query 37258 CTATTTCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCT 37317 ||||| | | ||||| | | || | | || ||||| ||||| ||| | || Sbjct 846 CTATTACGTACTCCATATTTGGCGATCTTTTCCTTAAGTTCGGCCCAATTCCAGAGTTCA 905 Query 37318 GTTGG-GTTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTT 37376 ||||| |||| | ||||||||| ||||| |||||||||||| | || ||| | | Sbjct 906 GTTGGCGTTCGGTC-CCACATATCGTATTGAAGAATACCTTTAGAGACCGGCGAACCTTC 964 Query 37377 ATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATA 37436 |||||||||||||||||| | |||||| | ||| ||||| | || | ||| | || Sbjct 965 ATATGTCTCATAAGGTCCCAACTCTTTAGCCAATTCACAACTGGCCTCCAAAGCGCCGTA 1024 Query 37437 ATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATA 37496 |||||| || || ||||| || ||||| | | ||| |||||| || || || | | Sbjct 1025 ATATATGGTCTCAAAAATCTGGATATTAAGTCGTTTCGCTTCTGGACTTTCAAAGGGCT- 1083 Query 37497 GCCCAATAATATAAACACA-TCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTT 37555 | | |||| | || ||| || |||||||||||||| || ||||| ||||||| ||| Sbjct 1084 GACGCATAAGAATAAAACAGTCGGCCAAACCCTGAACTCCAATACCGATGGGTCGGTGTC 1143 Query 37556 TCTTATTAGATCTAGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTA 37615 |||||||||| | | ||| ||| ||||| || || | || || |||||||| | Sbjct 1144 TCTTATTAGAGCGCTCTGTTTCCGGCACAGGATAGTAGTTAAGGTCAATGATTTTATTGA 1203 Query 37616 GATTT 37620 ||||| Sbjct 1204 GATTT 1208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468194812126800