Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_004928.1 Length=167560 Score E Sequences producing significant alignments: (Bits) Value seq54669 150 2e-31 >seq54669 Length=12211 Score = 150 bits (166), Expect = 2e-31 Identities = 241/346 (70%), Gaps = 0/346 (0%) Strand=Plus/Plus Query 142129 GGGCTAAATAAAGTAATATAATCATTTTTACCAAGGCGTTCCATCATGAGGTCATTAATC 142188 || ||||||| ||| || | || ||||| | | || | ||| | | |||||| Sbjct 11778 GGACTAAATAGAGTTATCTCTTCGTTTTTTACTAAACGCTGATACATAAATTTATTAATT 11837 Query 142189 TGAATTCCGTAGTCCATATGTCGAATACGGTTTTCATCCACGCCTTTGTTATTTTTCAGA 142248 || | ||||| |||||||| |||| ||| || || || || || ||||||||| | Sbjct 11838 TGTACCCCGTAATCCATATGGCGAACACGATTATCTTCAACACCACGGTTATTTTTTAAT 11897 Query 142249 ACTAATAGGTTCTCTACTTCTAAGTGCCACATTGGATAATACGCTGTAGCAGCACCACCA 142308 || || || || |||| ||||| ||||||| ||| || | || || ||||||||| Sbjct 11898 ACCAACAGATTTTCTATCTCTAAATGCCACAGGGGAAAAAATAACGTTGCTGCACCACCA 11957 Query 142309 CGAATACCACCTTGAGAACAAGATTTTACTGCAGTTTGGAAATGTTTCCAGAATGGAATA 142368 || | ||| |||||||||||||||||||| ||||| || || ||||| | || |||||| Sbjct 11958 CGCACACCTCCTTGAGAACAAGATTTTACCGCAGTCTGAAAGTGTTTATAAAACGGAATA 12017 Query 142369 ACACCCGTATGTCGAACTTCACCCATACCGATCTTAGAACCTTCTGCACGAAGCATACCA 142428 ||| ||||| | ||||||| || || | ||||| ||||| | |||| Sbjct 12018 CAACCGGTATGAAAAGCTTCACCATGACGAATTCCACTACCTTGCGCACGGATGCGACCA 12077 Query 142429 ACGTTGATACCGATACCAGCTCGTTTAGAAATATATTCAATAATTG 142474 | || ||||| || || || || | |||| ||||| || |||| Sbjct 12078 GCATTAATACCAATCCCCGCGCGCTGCGAAACATATTTTATGATTG 12123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 535686443424000