Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_005083.2 Length=244834 Score E Sequences producing significant alignments: (Bits) Value seq54669 129 9e-25 >seq54669 Length=12211 Score = 129 bits (142), Expect = 9e-25 Identities = 172/239 (72%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 147369 ATTCCTTTCTGGAAACACTTTCAGACTGCGGTTAAATCGTGTTCTCAAGGTGGTGTACGT 147428 ||||| || | |||||||||||||||||||| ||||| ||||||||||| ||||| ||| Sbjct 12016 ATTCCGTTTTATAAACACTTTCAGACTGCGGTAAAATCTTGTTCTCAAGGAGGTGTGCGT 11957 Query 147429 GGCGGTGCTGCGACTCTGACTTACCCGATCTGGCACTTAGAAGTAGAAAAGCTTCTTGTT 147488 || ||||| || || | || || | ||||| ||||| ||||||| || | || Sbjct 11956 GGTGGTGCAGCAACGTTATTTTTTCCCCTGTGGCATTTAGAGATAGAAAATCTGTTGGTA 11897 Query 147489 CTGAAGAACAACAAAGGTGTTGAAGAGAACCGTATTCGTCATCTTGACTACAGCGTATCA 147548 | || || ||| ||||||||||| || ||| |||| ||| | || ||| | ||| | Sbjct 11896 TTAAAAAATAACCGTGGTGTTGAAGATAATCGTGTTCGCCATATGGATTACGGGGTACAA 11837 Query 147549 ATTAACCGATTGATGATGCAACGCCTGGTTAATAACGAGTACATCACGCTATTCAGCCC 147607 ||||| ||| ||| || || | || || ||||| | || || ||||| || || Sbjct 11836 ATTAATAAATTTATGTATCAGCGTTTAGTAAAAAACGAAGAGATAACTCTATTTAGTCC 11778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 782789083282800